Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F15
         (509 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0672 - 10325935-10326150,10326308-10326400,10326568-103267...    30   0.94 
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806...    28   5.0  
10_01_0168 - 1883380-1883594,1884572-1888325                           27   6.6  
08_01_0136 - 1077800-1077811,1077929-1078046,1079410-1079549,107...    27   6.6  
03_05_0208 + 22006032-22006673,22006695-22007078                       27   6.6  
04_04_1636 + 34951841-34954322,34954440-34954627,34955737-349558...    27   8.8  

>03_02_0672 -
           10325935-10326150,10326308-10326400,10326568-10326708,
           10326828-10326893,10327099-10327359
          Length = 258

 Score = 30.3 bits (65), Expect = 0.94
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 254 IDGIEKMLRDDLLDLFHQYCVPYGQRKYRDSGRGKILNRTRHISPE 391
           +  + K+ RD LLD      VPYG  + +D   GKI  +  H S E
Sbjct: 50  VGSLAKVFRDGLLDAVDLSLVPYGNARVKD---GKISCQVEHGSEE 92


>02_05_0276 +
           27378994-27380094,27380185-27380250,27380586-27380660,
           27381927-27382025,27382353-27382436,27382519-27382868,
           27383190-27383406,27383579-27383658,27383760-27383850,
           27386544-27386672,27388771-27388858,27389967-27390097
          Length = 836

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
 Frame = -2

Query: 187 HFVRNS--HCFSDVKEEDLITCNIETEII*SFIAPT-------HNIIYRYLPKYRILNSI 35
           H++ +S  HC   +K   L+  NI+T++I + +  T       + ++ R  P+ R L   
Sbjct: 623 HWLNHSKEHCLVGIKGNPLVNRNIDTDVIVAEVRETSRKPDEMYPMLERISPRTRKLELF 682

Query: 34  PHQHHSH 14
              H++H
Sbjct: 683 ARMHNAH 689


>10_01_0168 - 1883380-1883594,1884572-1888325
          Length = 1322

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 140 IFLFNVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMLR 280
           I L+ +GK      +     ELLSN    H++  RH   D  +  LR
Sbjct: 506 IALYVMGKECVTITDRSYRKELLSNRSTYHLLVSRHRTGDHFDDFLR 552


>08_01_0136 -
           1077800-1077811,1077929-1078046,1079410-1079549,
           1079627-1080313
          Length = 318

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 326 QRKYRDSGRGKILNRTRHISPEPSRSLNKIKETXXTTVERIKPP 457
           +RK R  GRG +  RT+++S   SR L K +E     V  ++ P
Sbjct: 8   RRKGRRGGRGNVKRRTKYLS--LSRFLIKKEEEEEVVVVAVRSP 49


>03_05_0208 + 22006032-22006673,22006695-22007078
          Length = 341

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 323 GQRKYRDSGRGKILNRTRHISPEPSRSLNKIKETXXTTVER 445
           G R+Y +  RG+   R   I+   SR+L++  E   T + R
Sbjct: 298 GSRRYNEENRGRQRMREEDINISHSRNLSRSVEPGETRIRR 338


>04_04_1636 +
           34951841-34954322,34954440-34954627,34955737-34955838,
           34956101-34956177,34956258-34956319,34956504-34956511
          Length = 972

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 124 IETEII*SFIAPTHNIIYRYLPKYRILNSIPHQHHSH-HRPA 2
           I T+I  + ++ TH         + I   + HQHH H H PA
Sbjct: 160 IATDITGTNLSTTHEHRAEVKTLHTIAKEVQHQHHGHGHLPA 201


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,029,106
Number of Sequences: 37544
Number of extensions: 220190
Number of successful extensions: 565
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)