Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F15
         (509 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001310-1|AAH01310.1|  232|Homo sapiens chromosome 2 open readi...    54   3e-07
AC012360-2|AAY15011.1|  232|Homo sapiens unknown protein.              54   3e-07
AK223547-1|BAD97267.1|  595|Homo sapiens GATA binding protein 6 ...    25   8.9  
X95701-1|CAA64997.1|  449|Homo sapiens GATA-6 DNA binding protei...    25   9.1  
U66075-1|AAC50941.1|  449|Homo sapiens hGATA-6 protein.                25   9.1  
D87811-1|BAA22621.1|  449|Homo sapiens GATA-6 protein.                 25   9.1  

>BC001310-1|AAH01310.1|  232|Homo sapiens chromosome 2 open reading
           frame 49 protein.
          Length = 232

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
 Frame = +2

Query: 152 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQR 331
           +VG       E+LLHPELLS E L   +EQ+++ ++   ++ +D L DL+ Q+ +P  QR
Sbjct: 4   DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63

Query: 332 KYRDSGRGKILNRTR---HISPEPSRSLN---------------------KIKETXXTTV 439
               +  GK++ + R    I  E  RS                       K+K+T     
Sbjct: 64  DLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENGDN 123

Query: 440 ERIKPPPDLLSGSHETDKLXN 502
           +R+KPPP     S+   KL N
Sbjct: 124 DRLKPPPQASFTSNAFRKLSN 144


>AC012360-2|AAY15011.1|  232|Homo sapiens unknown protein.
          Length = 232

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
 Frame = +2

Query: 152 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQR 331
           +VG       E+LLHPELLS E L   +EQ+++ ++   ++ +D L DL+ Q+ +P  QR
Sbjct: 4   DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63

Query: 332 KYRDSGRGKILNRTR---HISPEPSRSLN---------------------KIKETXXTTV 439
               +  GK++ + R    I  E  RS                       K+K+T     
Sbjct: 64  DLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENGDN 123

Query: 440 ERIKPPPDLLSGSHETDKLXN 502
           +R+KPPP     S+   KL N
Sbjct: 124 DRLKPPPQASFTSNAFRKLSN 144


>AK223547-1|BAD97267.1|  595|Homo sapiens GATA binding protein 6
           variant protein.
          Length = 595

 Score = 24.6 bits (51), Expect(2) = 8.9
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 73  YRYLPKYRILNSIPHQHHSHH 11
           Y  L   R LN   H HH HH
Sbjct: 310 YSSLSAARPLNGTYHHHHHHH 330



 Score = 23.0 bits (47), Expect(2) = 8.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 31  HQHHSHHRPA 2
           H HH HH P+
Sbjct: 326 HHHHHHHHPS 335


>X95701-1|CAA64997.1|  449|Homo sapiens GATA-6 DNA binding protein
           protein.
          Length = 449

 Score = 24.6 bits (51), Expect(2) = 9.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 73  YRYLPKYRILNSIPHQHHSHH 11
           Y  L   R LN   H HH HH
Sbjct: 164 YSSLSAARPLNGTYHHHHHHH 184



 Score = 23.0 bits (47), Expect(2) = 9.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 31  HQHHSHHRPA 2
           H HH HH P+
Sbjct: 180 HHHHHHHHPS 189


>U66075-1|AAC50941.1|  449|Homo sapiens hGATA-6 protein.
          Length = 449

 Score = 24.6 bits (51), Expect(2) = 9.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 73  YRYLPKYRILNSIPHQHHSHH 11
           Y  L   R LN   H HH HH
Sbjct: 164 YSSLSAARPLNGTYHHHHHHH 184



 Score = 23.0 bits (47), Expect(2) = 9.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 31  HQHHSHHRPA 2
           H HH HH P+
Sbjct: 180 HHHHHHHHPS 189


>D87811-1|BAA22621.1|  449|Homo sapiens GATA-6 protein.
          Length = 449

 Score = 24.6 bits (51), Expect(2) = 9.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 73  YRYLPKYRILNSIPHQHHSHH 11
           Y  L   R LN   H HH HH
Sbjct: 164 YSSLSAARPLNGTYHHHHHHH 184



 Score = 23.0 bits (47), Expect(2) = 9.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 31  HQHHSHHRPA 2
           H HH HH P+
Sbjct: 180 HHHHHHHHPS 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,688,388
Number of Sequences: 237096
Number of extensions: 1230098
Number of successful extensions: 2907
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2907
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)