Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F15
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical pr...    28   4.5  
L13200-2|ABE73330.1|  810|Caenorhabditis elegans Hypothetical pr...    28   4.5  
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z93374-6|CAB07559.1|  108|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    27   7.9  

>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +2

Query: 197 PELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQRKYRDSGRGKIL 364
           PE    E LT I +   ++ + +EK + DDL     QY   +   K +   RG+ L
Sbjct: 83  PEWPDREHLTAIFDNLDIQTNELEKTVCDDLPQTVTQYVNQFPDLKKKIEKRGRKL 138


>Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical
           protein ZK1307.6 protein.
          Length = 702

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 46  LNSIPHQHHSHH 11
           L+S PHQHH+HH
Sbjct: 137 LSSHPHQHHNHH 148


>L13200-2|ABE73330.1|  810|Caenorhabditis elegans Hypothetical
           protein ZK1236.3b protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +2

Query: 254 IDGIEKMLRDDLLDLFHQYCVPYGQRKYRDSGRGKILNRTRHISPE----PSRSLNKIKE 421
           I  ++KM   DL  +FH  C+   QR  R   R +++ + + I+ +    P+ ++NK K 
Sbjct: 370 ISEVQKMRPSDLESIFHSICIASVQRIKR---RNELVQQLQEINAQSCKSPTMTMNK-KF 425

Query: 422 TXXTTVERIK 451
           T     +R++
Sbjct: 426 TLAKAYQRVQ 435


>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
           protein ZK1236.3a protein.
          Length = 1000

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +2

Query: 254 IDGIEKMLRDDLLDLFHQYCVPYGQRKYRDSGRGKILNRTRHISPE----PSRSLNKIKE 421
           I  ++KM   DL  +FH  C+   QR  R   R +++ + + I+ +    P+ ++NK K 
Sbjct: 560 ISEVQKMRPSDLESIFHSICIASVQRIKR---RNELVQQLQEINAQSCKSPTMTMNK-KF 615

Query: 422 TXXTTVERIK 451
           T     +R++
Sbjct: 616 TLAKAYQRVQ 625


>Z93374-6|CAB07559.1|  108|Caenorhabditis elegans Hypothetical
           protein C06C6.8 protein.
          Length = 108

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +2

Query: 326 QRKYRDSGRGKILNRTRHISPEPSRSLNKIKETXXTTVERIKPPPDLL----SGSHETDK 493
           ++K++D GR  ++ R   + P+P      +KET   T    + PP       SG+   D 
Sbjct: 31  KKKFKDDGRVDLVPRNAPVRPDP------VKETSAQTCPTAQTPPAKTPMERSGNVAEDT 84

Query: 494 LXNV 505
           L NV
Sbjct: 85  LANV 88


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 203 LLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYC 313
           LL   Q+  ++  RHL +   ++ +RDD L L  + C
Sbjct: 357 LLDCRQIAELVNLRHLSLKNNKEGVRDDSLQLIIKNC 393


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 203 LLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYC 313
           LL   Q+  ++  RHL +   ++ +RDD L L  + C
Sbjct: 357 LLDCRQIAELVNLRHLSLKNNKEGVRDDSLQLIIKNC 393


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 203 LLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYC 313
           LL   Q+  ++  RHL +   ++ +RDD L L  + C
Sbjct: 255 LLDCRQIAELVNLRHLSLKNNKEGVRDDSLQLIIKNC 291


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 203 LLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYC 313
           LL   Q+  ++  RHL +   ++ +RDD L L  + C
Sbjct: 357 LLDCRQIAELVNLRHLSLKNNKEGVRDDSLQLIIKNC 393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,752,982
Number of Sequences: 27780
Number of extensions: 206548
Number of successful extensions: 581
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)