Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F14
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68161-6|CAA92295.2|  782|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF149286-1|AAF99085.1|  782|Caenorhabditis elegans KRP95 protein.      30   1.5  
AB017106-1|BAA88837.1|  607|Caenorhabditis elegans Kinesin like ...    30   1.5  
AC024882-11|AAX22280.1|  333|Caenorhabditis elegans Seven tm rec...    29   2.5  
AC024882-10|AAF60929.1|  341|Caenorhabditis elegans Seven tm rec...    29   2.5  
AC006607-5|AAF60371.2|  640|Caenorhabditis elegans Hypothetical ...    29   2.5  

>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
           protein F20C5.2b protein.
          Length = 1130

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 421 LFRLSSMETIPNSLKDLLEDEKIYKVGVXASDDGKYLFQDYSVKLKSTL 567
           L R S +E     L+DLLE E   K+ +    DG    +D + KL  T+
Sbjct: 142 LVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKLTRTV 190


>Z68161-6|CAA92295.2|  782|Caenorhabditis elegans Hypothetical
           protein F20C5.2a protein.
          Length = 782

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 421 LFRLSSMETIPNSLKDLLEDEKIYKVGVXASDDGKYLFQDYSVKLKSTL 567
           L R S +E     L+DLLE E   K+ +    DG    +D + KL  T+
Sbjct: 142 LVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKLTRTV 190


>AF149286-1|AAF99085.1|  782|Caenorhabditis elegans KRP95 protein.
          Length = 782

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 421 LFRLSSMETIPNSLKDLLEDEKIYKVGVXASDDGKYLFQDYSVKLKSTL 567
           L R S +E     L+DLLE E   K+ +    DG    +D + KL  T+
Sbjct: 142 LVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKLTRTV 190


>AB017106-1|BAA88837.1|  607|Caenorhabditis elegans Kinesin like
           protein (klp-11) protein.
          Length = 607

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 421 LFRLSSMETIPNSLKDLLEDEKIYKVGVXASDDGKYLFQDYSVKLKSTL 567
           L R S +E     L+DLLE E   K+ +    DG    +D + KL  T+
Sbjct: 105 LVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKLTRTV 153


>AC024882-11|AAX22280.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 169,isoform b protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 21  IVYIY*MLYCVVKIS*N-VGVYWFCLLYYCXLFIYHAIKNKIRDLFXNSSSCC 176
           I++ + ++Y ++  S   +G Y + L+Y+C   I ++I + I + F  S   C
Sbjct: 19  IIFNFTLIYLILTRSPKKMGTYKYLLIYFCCFSILYSILDIIVEPFIQSHGSC 71


>AC024882-10|AAF60929.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 169,isoform a protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 21  IVYIY*MLYCVVKIS*N-VGVYWFCLLYYCXLFIYHAIKNKIRDLFXNSSSCC 176
           I++ + ++Y ++  S   +G Y + L+Y+C   I ++I + I + F  S   C
Sbjct: 19  IIFNFTLIYLILTRSPKKMGTYKYLLIYFCCFSILYSILDIIVEPFIQSHGSC 71


>AC006607-5|AAF60371.2|  640|Caenorhabditis elegans Hypothetical
           protein C09E7.4 protein.
          Length = 640

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +1

Query: 430 LSSMETIPNSLKDLLEDEKIYKVGVXASDDGKYLFQDYSVKLKSTL 567
           L SM T+P   K+  E+  + K+G   +   + + +++  ++KSTL
Sbjct: 497 LRSMRTMPEEFKNKTEELIVKKLGTVDAQQEESILKNFQKQVKSTL 542


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,416,856
Number of Sequences: 27780
Number of extensions: 238591
Number of successful extensions: 602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)