Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F12
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   2.5  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   2.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   3.4  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   4.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   4.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   4.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   5.9  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   5.9  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 201 TFHIREVHSGHSGLRQDL 254
           TFH+ +V SGH  LR+ L
Sbjct: 928 TFHLSQVLSGHGFLREYL 945


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 106 RWCRRKCDRIPRSPQRRVATQRFATSSWQMAL 11
           +WCRR  DR+ R   + + T  F ++S ++A+
Sbjct: 811 QWCRRILDRVQRLLAQGI-TSAFHSTSCEVAV 841


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 106 RWCRRKCDRIPRSPQRRVATQRFATSSWQMA 14
           R CRR  +R+ R   RRVA + F T  ++ A
Sbjct: 868 RECRRLLERVQRVSARRVA-RTFRTVRYETA 897



 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 201  TFHIREVHSGHSGLRQDL 254
            TFH+ +V SGH   R+ L
Sbjct: 980  TFHLAQVLSGHGFFREYL 997


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 201  TFHIREVHSGHSGLRQDL*H 260
            TFH+ +V SGH   R  L H
Sbjct: 976  TFHLAQVLSGHGFFRDYLCH 995


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 204 FHIREVHSGHSGLRQDL 254
           FH+ +V SGH   R DL
Sbjct: 938 FHLSQVLSGHGFFRDDL 954


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 201  TFHIREVHSGHSGLRQDL 254
            TFH+ +V SGH   R+ L
Sbjct: 988  TFHLSQVLSGHGFFREHL 1005


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 327  LALHAEIDEVIADS 286
            L +HAE DEVI DS
Sbjct: 1250 LIIHAEEDEVIEDS 1263


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 357 VYIVMNF*SALALHAEIDEVIADSALGDVRRSGAIGLV 244
           +Y+V    S + L A     I D A+ DVR  G I +V
Sbjct: 285 MYVVGFCESMIDLLASFGVAIVDGAVNDVRIIGCITIV 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,302
Number of Sequences: 2352
Number of extensions: 9236
Number of successful extensions: 32
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)