BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_F12
(505 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK055200-1|BAB70872.1| 799|Homo sapiens protein ( Homo sapiens ... 32 0.99
BC030991-1|AAH30991.1| 192|Homo sapiens OR7E91P protein protein. 30 5.3
BC014374-1|AAH14374.1| 167|Homo sapiens OR7E91P protein protein. 30 5.3
BC028100-1|AAH28100.1| 589|Homo sapiens KLHL25 protein protein. 29 9.2
AY764034-1|AAV51405.1| 589|Homo sapiens ENC2 protein. 29 9.2
AL136796-1|CAB66730.1| 589|Homo sapiens hypothetical protein pr... 29 9.2
AK022649-1|BAB14155.1| 438|Homo sapiens protein ( Homo sapiens ... 29 9.2
>AK055200-1|BAB70872.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ30638 fis, clone CTONG2002721, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13. ).
Length = 799
Score = 32.3 bits (70), Expect = 0.99
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 177 PPFQLASCTFHIREVHSGHSGLRQDL*HRFCEHH-PRRNRL*LRQSPHEERARIKNSLRC 353
PP TFH +E HS + L ++ E+ P+ N+ L PH+ +IK + C
Sbjct: 622 PPHYTELLTFHSKEETGSHSPVCLQLHYKHSENRGPQGNQARLSSVPHKAELQIKLNPVC 681
Query: 354 IHFCLIIAPAIN 389
+ I +N
Sbjct: 682 CELDISIVDRLN 693
>BC030991-1|AAH30991.1| 192|Homo sapiens OR7E91P protein protein.
Length = 192
Score = 29.9 bits (64), Expect = 5.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 14 CHLP**SCK-SLCCYSPLR*SWNAVTLSSAPASIGPWSTTMTCSTARKCSVRELKTSISA 190
C +P SC LCC SP W ++ LS ++ S + +++ CS SI
Sbjct: 120 CWIP--SCAVGLCCNSPSSRMWKSLILSVTHLNLS--SLPVLTASSIACSY----ISIVL 171
Query: 191 CLMYLPYSG 217
CL++ P+ G
Sbjct: 172 CLVFFPFQG 180
>BC014374-1|AAH14374.1| 167|Homo sapiens OR7E91P protein protein.
Length = 167
Score = 29.9 bits (64), Expect = 5.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 14 CHLP**SCK-SLCCYSPLR*SWNAVTLSSAPASIGPWSTTMTCSTARKCSVRELKTSISA 190
C +P SC LCC SP W ++ LS ++ S + +++ CS SI
Sbjct: 95 CWIP--SCAVGLCCNSPSSRMWKSLILSVTHLNLS--SLPVLTASSIACSY----ISIVL 146
Query: 191 CLMYLPYSG 217
CL++ P+ G
Sbjct: 147 CLVFFPFQG 155
>BC028100-1|AAH28100.1| 589|Homo sapiens KLHL25 protein protein.
Length = 589
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 35 CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 136
CK+L CY P +WN +T + P S+ P + T
Sbjct: 552 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 583
>AY764034-1|AAV51405.1| 589|Homo sapiens ENC2 protein.
Length = 589
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 35 CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 136
CK+L CY P +WN +T + P S+ P + T
Sbjct: 552 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 583
>AL136796-1|CAB66730.1| 589|Homo sapiens hypothetical protein
protein.
Length = 589
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 35 CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 136
CK+L CY P +WN +T + P S+ P + T
Sbjct: 552 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 583
>AK022649-1|BAB14155.1| 438|Homo sapiens protein ( Homo sapiens
cDNA FLJ12587 fis, clone NT2RM4001217, moderately
similar to Mus musculus actin-binding protein (ENC-1)
mRNA. ).
Length = 438
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 35 CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 136
CK+L CY P +WN +T + P S+ P + T
Sbjct: 401 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 432
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,861,682
Number of Sequences: 237096
Number of extensions: 1260319
Number of successful extensions: 2752
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2752
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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