Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F12
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    27   5.8  
Z92834-1|CAB07382.1|  564|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    27   7.7  

>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 70   IVECGHTFVGTSVNRPLVYHHDVQYSSKMFRKR 168
            ++E G   V   V + + Y +++ +  KMFRK+
Sbjct: 2287 VIEIGRLMVEEDVRKWMEYQYEMTFVKKMFRKK 2319


>Z92834-1|CAB07382.1|  564|Caenorhabditis elegans Hypothetical
           protein F39B2.1 protein.
          Length = 564

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 91  FVGTSVNRPLVYHHDVQYSSK 153
           F  + +NR  VYH DV YS K
Sbjct: 423 FTESELNRHAVYHSDVMYSCK 443


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
            protein F48E3.8a protein.
          Length = 2427

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 193  PHVPSIFGRSIQGILAFDKTYSTASANITQGGIGYNFVN 309
            P+ PS+  R+++ I    K     SA+     IGY+ VN
Sbjct: 1386 PYEPSVRSRNVKAISGRRKVNRVVSASTINCPIGYDLVN 1424


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,804,593
Number of Sequences: 27780
Number of extensions: 201775
Number of successful extensions: 465
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)