Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F10
         (543 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3LW74 Cluster: Putative uncharacterized protein; n=1; ...    32   7.4  
UniRef50_A6W188 Cluster: Putative uncharacterized protein; n=2; ...    32   9.8  
UniRef50_Q7RG50 Cluster: Putative uncharacterized protein PY0449...    32   9.8  

>UniRef50_Q3LW74 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 591

 Score = 32.3 bits (70), Expect = 7.4
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 347 IYRHTKSNK*YEIHTHKKYIIILNLALVGSTLYIHIIVSLN*F 219
           I +   SNK Y+I  HK ++  L L+ + S LY+H  V  + F
Sbjct: 538 IRKQKYSNKNYKISNHKIFLSFLKLSYLSSKLYLHKKVKFSTF 580


>UniRef50_A6W188 Cluster: Putative uncharacterized protein; n=2;
           Marinomonas|Rep: Putative uncharacterized protein -
           Marinomonas sp. MWYL1
          Length = 702

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 288 NIFFMCMNFILFVGFGVPINDRQTTYNRLMYGRFPIG-NFF 407
           N FFM     L+VG+G P ND    Y +  Y R  +G  FF
Sbjct: 231 NGFFMAPETFLYVGYGSPENDLAIEYFKKQYARQVMGWGFF 271


>UniRef50_Q7RG50 Cluster: Putative uncharacterized protein PY04499;
            n=1; Plasmodium yoelii yoelii|Rep: Putative
            uncharacterized protein PY04499 - Plasmodium yoelii
            yoelii
          Length = 1784

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -1

Query: 126  IEAAFPNKVKDEPFTLVTINKLFNY*KEILSVLLLCSM 13
            IE   PNK++D P ++ T N L+NY K +   +L+ S+
Sbjct: 1256 IEKYDPNKLEDIPSSIRTANDLYNYIKRMNMKILIASV 1293


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,921,601
Number of Sequences: 1657284
Number of extensions: 9267013
Number of successful extensions: 17847
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17846
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)