Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F10
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   4.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.2  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 442 GYVLLCARLYFSFITLKKNLASLGRV 519
           GY + CAR  F     KK L SL R+
Sbjct: 204 GYAISCARYRFMPDIKKKGLHSLPRL 229


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 428 YSLNKDTFYCVHVYIFH 478
           Y + KDT   +H+Y  H
Sbjct: 79  YLIPKDTITIIHIYDLH 95


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +2

Query: 293 IFYVYEFHIICWIW 334
           +F ++EF+  C++W
Sbjct: 166 LFALHEFYGFCYLW 179


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 99  KDEPFTLVTINKLFNY*KEIL 37
           +D PFT    N+ F Y K +L
Sbjct: 131 RDRPFTCEVCNRSFGY-KHVL 150


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 5/23 (21%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 YIDLIHYSLNKDTFYCVHVYIFH 478
           +  ++   L + +F C+H+ + H
Sbjct: 70  FYKVVEKILTQSSFECIHLSVLH 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,638
Number of Sequences: 336
Number of extensions: 3024
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)