Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F10
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016419-3|AAG24048.1|  529|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF022967-12|AAB69873.2|  467|Caenorhabditis elegans Hypothetical...    27   8.7  
AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AF016419-3|AAG24048.1|  529|Caenorhabditis elegans Hypothetical
           protein F07G11.3 protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 368 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 258
           +IC  P+       N  + +H +KKY   +NL LV S
Sbjct: 169 VICVAPLFVSEQWQNFLFAVHIYKKYGAFVNLYLVSS 205


>Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical
           protein ZC455.7 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 293 YIIILNLALVGSTLYIHIIVSLN*FYFNLEDAIFFNCF 180
           YIII+ +A + + L + I+   N F+ NL+  I+F  F
Sbjct: 7   YIIIVLIASIATILCLLIVGRSNTFHPNLQGPIWFTAF 44


>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 23/77 (29%), Positives = 31/77 (40%)
 Frame = +3

Query: 303 CMNFILFVGFGVPINDRQTTYNRLMYGRFPIGNFFHTLXXXXXXXXXXXFTVCTFIFFIY 482
           C NFIL     V +N  QT  NR++         F+ L           F +    FFIY
Sbjct: 82  CFNFIL----AVSVNSLQT--NRVLIALLFFA-LFNVLYIITQAFHVLIFVLAVERFFIY 134

Query: 483 YFKKELSQFRACLILIK 533
           +F      F++  I IK
Sbjct: 135 FFPSSEKIFKSLSIKIK 151


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 368 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 258
           ++C+ P+       N  + +H +KK+   +NL LV S
Sbjct: 131 VVCTSPLFVSEQWQNFLFAVHIYKKFDAHMNLYLVSS 167


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 368 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 258
           ++C+ P+       N  + +H +KK+   +NL LV S
Sbjct: 158 VVCTSPLFVSEQWQNFLFAVHIYKKFDAHMNLYLVSS 194


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical protein
            F09C3.1 protein.
          Length = 1391

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 497  FFFKVINEKYKRAHSKTYPYLNYNVLNQCMEEI 399
            +F  ++N      H+K   Y+N NV N  ++EI
Sbjct: 1026 WFLSLLNANVHVIHNKFIDYINKNVRNVALDEI 1058


>AF022967-12|AAB69873.2|  467|Caenorhabditis elegans Hypothetical
           protein C13A2.1 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 368 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 258
           ++C  P+       N  + +H +KKY   +NL L+ +
Sbjct: 164 VVCVAPLFVSEQWQNFLFAVHIYKKYGAFVNLYLISA 200


>AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical
           protein F07G11.4 protein.
          Length = 499

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 368 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 258
           ++C  P+       N  + +H +KKY   +NL L+ +
Sbjct: 152 VVCIAPLFVSEQWQNFLFAVHIYKKYGAFVNLYLISA 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,660,766
Number of Sequences: 27780
Number of extensions: 236841
Number of successful extensions: 463
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)