BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_F07
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D63486-1|BAA09773.2| 315|Homo sapiens KIAA0152 protein. 221 2e-57
BC016297-1|AAH16297.1| 292|Homo sapiens KIAA0152 protein. 221 2e-57
BC000371-1|AAH00371.1| 292|Homo sapiens KIAA0152 protein. 221 2e-57
DQ926309-1|ABK81527.1| 125|Homo sapiens immunoglobulin heavy ch... 30 7.8
>D63486-1|BAA09773.2| 315|Homo sapiens KIAA0152 protein.
Length = 315
Score = 221 bits (541), Expect = 2e-57
Identities = 103/174 (59%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Frame = +2
Query: 242 GLGE-IIYAINAGGPAHTDIYGIHYEKDPLQGRIGTASDYGKQLVMIGRVNPKDEILYQT 418
GL E +I+A+NAGG AH D++GIH+ KDPL+GR+G ASDYG +L ++ R NP+D+ILYQT
Sbjct: 66 GLPESVIWAVNAGGEAHVDVHGIHFRKDPLEGRVGRASDYGMKLPIL-RSNPEDQILYQT 124
Query: 419 ERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNMKVFDVVLNGDHTIVADLDIFDKVG 598
ERY+ TFGY++P ++GDYVLVLKF+EVYF+ KVFDV LNG H +V DLDIFD+VG
Sbjct: 125 ERYNEETFGYEVPIKEEGDYVLVLKFAEVYFAQSQQKVFDVRLNG-HVVVKDLDIFDRVG 183
Query: 599 RGVAHDEYIPYTIKNGKLYYNEEESDIRGGKIKVEFIKGYRDNPXINALYVMTG 760
AHDE IP +I+ GKL E S GK+ +EF+KGY DNP + ALY+M G
Sbjct: 184 HSTAHDEIIPMSIRKGKLSVQGEVSTFT-GKLYIEFVKGYYDNPKVCALYIMAG 236
>BC016297-1|AAH16297.1| 292|Homo sapiens KIAA0152 protein.
Length = 292
Score = 221 bits (541), Expect = 2e-57
Identities = 103/174 (59%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Frame = +2
Query: 242 GLGE-IIYAINAGGPAHTDIYGIHYEKDPLQGRIGTASDYGKQLVMIGRVNPKDEILYQT 418
GL E +I+A+NAGG AH D++GIH+ KDPL+GR+G ASDYG +L ++ R NP+D+ILYQT
Sbjct: 43 GLPESVIWAVNAGGEAHVDVHGIHFRKDPLEGRVGRASDYGMKLPIL-RSNPEDQILYQT 101
Query: 419 ERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNMKVFDVVLNGDHTIVADLDIFDKVG 598
ERY+ TFGY++P ++GDYVLVLKF+EVYF+ KVFDV LNG H +V DLDIFD+VG
Sbjct: 102 ERYNEETFGYEVPIKEEGDYVLVLKFAEVYFAQSQQKVFDVRLNG-HVVVKDLDIFDRVG 160
Query: 599 RGVAHDEYIPYTIKNGKLYYNEEESDIRGGKIKVEFIKGYRDNPXINALYVMTG 760
AHDE IP +I+ GKL E S GK+ +EF+KGY DNP + ALY+M G
Sbjct: 161 HSTAHDEIIPMSIRKGKLSVQGEVSTFT-GKLYIEFVKGYYDNPKVCALYIMAG 213
>BC000371-1|AAH00371.1| 292|Homo sapiens KIAA0152 protein.
Length = 292
Score = 221 bits (541), Expect = 2e-57
Identities = 103/174 (59%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Frame = +2
Query: 242 GLGE-IIYAINAGGPAHTDIYGIHYEKDPLQGRIGTASDYGKQLVMIGRVNPKDEILYQT 418
GL E +I+A+NAGG AH D++GIH+ KDPL+GR+G ASDYG +L ++ R NP+D+ILYQT
Sbjct: 43 GLPESVIWAVNAGGEAHVDVHGIHFRKDPLEGRVGRASDYGMKLPIL-RSNPEDQILYQT 101
Query: 419 ERYHHSTFGYDIPANKDGDYVLVLKFSEVYFSSPNMKVFDVVLNGDHTIVADLDIFDKVG 598
ERY+ TFGY++P ++GDYVLVLKF+EVYF+ KVFDV LNG H +V DLDIFD+VG
Sbjct: 102 ERYNEETFGYEVPIKEEGDYVLVLKFAEVYFAQSQQKVFDVRLNG-HVVVKDLDIFDRVG 160
Query: 599 RGVAHDEYIPYTIKNGKLYYNEEESDIRGGKIKVEFIKGYRDNPXINALYVMTG 760
AHDE IP +I+ GKL E S GK+ +EF+KGY DNP + ALY+M G
Sbjct: 161 HSTAHDEIIPMSIRKGKLSVQGEVSTFT-GKLYIEFVKGYYDNPKVCALYIMAG 213
>DQ926309-1|ABK81527.1| 125|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 125
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 302 GIHYEKDPLQGRIGTASDYGKQ---LVMIGRVNPKDEILYQTERYHHSTFGY 448
GI Y L+GR+ ++D K L + + + Y RY+H T GY
Sbjct: 56 GITYYNPSLRGRVTISADTSKNQFSLKLSSVIAADTAVYYCARRYYHDTLGY 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,712,458
Number of Sequences: 237096
Number of extensions: 2004180
Number of successful extensions: 3489
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3480
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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