Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F05
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    29   0.035
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.4  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 29.1 bits (62), Expect = 0.035
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 554 LEPSLRSXASIVIACAGQMASQSLQAMHLSSPEG*RRRACSPLNRGDSGP 405
           L P   + A+ + A A   A+Q    + ++SP G  R + SPL    S P
Sbjct: 138 LPPQTAAMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRASVSPLISSSSSP 187


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 630 CNRGRSEFXVFNRDTRG 680
           CNR R++  + NRDT G
Sbjct: 910 CNRIRNQRWIVNRDTSG 926


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 279 HVLFLCIYIFISRYVLWVNLLN 214
           H+LF C +IF + ++L++  L+
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLD 200



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -2

Query: 276 VLFLCIYIFISRYVLW-VNLL 217
           ++ LCIY F   ++L+ V+LL
Sbjct: 233 IILLCIYYFYYAFILFTVHLL 253



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 279 HVLFLCIYIFISRYVLWV 226
           H+LF C +I  + ++L++
Sbjct: 265 HLLFCCAFIIFTMHLLFL 282


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 558 NHSIRY*HDKVYLLWLLSR 614
           N  I + H  ++LLWLLS+
Sbjct: 456 NDFISHQHAWIWLLWLLSQ 474


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 558 NHSIRY*HDKVYLLWLLSR 614
           N  I + H  ++LLWLLS+
Sbjct: 456 NDFISHQHAWIWLLWLLSQ 474


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 558 NHSIRY*HDKVYLLWLLSR 614
           N  I + H  ++LLWLLS+
Sbjct: 456 NDFISHQHAWIWLLWLLSQ 474


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 558 NHSIRY*HDKVYLLWLLSR 614
           N  I + H  ++LLWLLS+
Sbjct: 456 NDFISHQHAWIWLLWLLSQ 474


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 276 VLFLCIYIFISRYVLWVNLLNISF 205
           V+F+   +  S  ++W++L+ ISF
Sbjct: 258 VIFVICVLVQSEKIVWLHLVYISF 281


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -2

Query: 654 EIRTFHDCINRTGFLTEATIDTLCHVNIVSSGSPR 550
           +++  ++  ++ GFL E  +D L  +N +    PR
Sbjct: 76  KLKLTNNISDKHGFLKEKAVDFLTILNSMHKYQPR 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,235
Number of Sequences: 336
Number of extensions: 3373
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)