Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F05
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U65579-1|AAB51776.1|  210|Homo sapiens mitochondrial NADH dehydr...   268   1e-71
BC119754-1|AAI19755.1|  210|Homo sapiens NADH dehydrogenase (ubi...   268   1e-71
AF038406-1|AAC34273.1|  210|Homo sapiens NADH dehydrogenase-ubiq...   268   1e-71
AK223114-1|BAD96834.1|  210|Homo sapiens NADH dehydrogenase (ubi...   267   2e-71
BC119753-1|AAI19754.1|   64|Homo sapiens NDUFS8 protein protein.       76   1e-13

>U65579-1|AAB51776.1|  210|Homo sapiens mitochondrial NADH
           dehydrogenase-ubiquinone Fe-S protein 8, 23 kDa subunit
           prec protein.
          Length = 210

 Score =  268 bits (657), Expect = 1e-71
 Identities = 118/146 (80%), Positives = 131/146 (89%)
 Frame = +1

Query: 247 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFXEPATINYPFEKGPLSPRF 426
           YKYVN ++ +M  ++++DRAA+T+ WTEL RG  +TL+++F EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 427 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXERKDGSRRTTRYDIDMTKCIYCGF 606
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEA  R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGF 155

Query: 607 CQEXXPVDAIVEGPNFXFSTETHEEL 684
           CQE  PVDAIVEGPNF FSTETHEEL
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEEL 181


>BC119754-1|AAI19755.1|  210|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
           reductas protein.
          Length = 210

 Score =  268 bits (657), Expect = 1e-71
 Identities = 118/146 (80%), Positives = 131/146 (89%)
 Frame = +1

Query: 247 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFXEPATINYPFEKGPLSPRF 426
           YKYVN ++ +M  ++++DRAA+T+ WTEL RG  +TL+++F EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 427 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXERKDGSRRTTRYDIDMTKCIYCGF 606
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEA  R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGF 155

Query: 607 CQEXXPVDAIVEGPNFXFSTETHEEL 684
           CQE  PVDAIVEGPNF FSTETHEEL
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEEL 181


>AF038406-1|AAC34273.1|  210|Homo sapiens NADH
           dehydrogenase-ubiquinone Fe-S protein 8 23 kDa subunit
           protein.
          Length = 210

 Score =  268 bits (657), Expect = 1e-71
 Identities = 118/146 (80%), Positives = 131/146 (89%)
 Frame = +1

Query: 247 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFXEPATINYPFEKGPLSPRF 426
           YKYVN ++ +M  ++++DRAA+T+ WTEL RG  +TL+++F EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 427 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXERKDGSRRTTRYDIDMTKCIYCGF 606
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEA  R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGF 155

Query: 607 CQEXXPVDAIVEGPNFXFSTETHEEL 684
           CQE  PVDAIVEGPNF FSTETHEEL
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEEL 181


>AK223114-1|BAD96834.1|  210|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
           reductas protein.
          Length = 210

 Score =  267 bits (655), Expect = 2e-71
 Identities = 118/146 (80%), Positives = 130/146 (89%)
 Frame = +1

Query: 247 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFXEPATINYPFEKGPLSPRF 426
           YKYVN ++ +M   +++DRAA+T+ WTEL RG  +TL+++F EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMESVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 427 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXERKDGSRRTTRYDIDMTKCIYCGF 606
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEA  R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRTDGSRRTTRYDIDMTKCIYCGF 155

Query: 607 CQEXXPVDAIVEGPNFXFSTETHEEL 684
           CQE  PVDAIVEGPNF FSTETHEEL
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEEL 181


>BC119753-1|AAI19754.1|   64|Homo sapiens NDUFS8 protein protein.
          Length = 64

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +1

Query: 580 MTKCIYCGFCQEXXPVDAIVEGPNFXFSTETHEEL 684
           MTKCIYCGFCQE  PVDAIVEGPNF FSTETHEEL
Sbjct: 1   MTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEEL 35


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,787,957
Number of Sequences: 237096
Number of extensions: 2010476
Number of successful extensions: 7783
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7779
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)