Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_F05
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              24   1.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    24   1.6  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   6.3  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 490 CEAICPAQAITIEAXERKDGSRRTTRYDIDMTKCIYCGFC 609
           CE +     IT +  +     +RT   DI +TKC   GFC
Sbjct: 36  CETLQSEVHITKDEYDEIGRLKRTCSGDISVTKCE--GFC 73


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 490 CEAICPAQAITIEAXERKDGSRRTTRYDIDMTKCIYCGFC 609
           CE +     IT +  +     +RT   DI +TKC   GFC
Sbjct: 36  CETLQSEVHITKDEYDEIGRLKRTCSGDISVTKCE--GFC 73


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 600 TIDTLCHVNIVSSG 559
           T DT+C +NIV  G
Sbjct: 502 TYDTICQLNIVHYG 515


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,769
Number of Sequences: 438
Number of extensions: 3925
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)