Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E21
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U80023-4|AAG24038.1|  318|Caenorhabditis elegans Serpentine rece...    29   5.0  
U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z81102-1|CAB03202.1|  320|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical
           protein F13G3.3 protein.
          Length = 501

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 303 YQYLFSGPTTRLYFAHSNSNFQKKEYRNNRLFEIIHKVVYLQNE 434
           ++YL S   T  YF +S  N + K Y+   +F I H +  +++E
Sbjct: 275 FRYLASEHPTVAYFTYSKENTRIKAYKRANVFSIEHVLRNIKHE 318


>Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical
           protein C12D8.12 protein.
          Length = 351

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 30/118 (25%), Positives = 51/118 (43%)
 Frame = -2

Query: 725 LLPVPKSIIMCLLRKKNITVHGSYNSYILLKSGTSVMSTKYMTAKFFTFSAMLYNTSSIF 546
           +L + K I+ C     +I ++      IL KS + + S KY+   + + SA+ Y+   + 
Sbjct: 1   MLELLKDIVQCFALLISIFLNTILTYLILTKSNSKMGSYKYI-MMYLSLSALCYSVLGMI 59

Query: 545 IHVGSQSCPNLITTTRSSSDRMA*STCQPLCRWPSI*LILQINYFMYYFKQTIISVFF 372
           +   S    +   TT SS           L  W S  + L   +  Y+F  ++ISV F
Sbjct: 60  VRPVSLKLKSRKKTTSSSVS---------LFFWMSFMITLICGF--YFFFASLISVHF 106


>U80023-4|AAG24038.1|  318|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 25 protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/56 (26%), Positives = 32/56 (57%)
 Frame = -2

Query: 707 SIIMCLLRKKNITVHGSYNSYILLKSGTSVMSTKYMTAKFFTFSAMLYNTSSIFIH 540
           + +M L  KK+  +  SY+  I +K+GT ++++   +  FF    ++ + SSI ++
Sbjct: 19  AFMMYLALKKSPKIMRSYSVVITIKTGTDILAS---SMSFFVMQRIITDGSSIVVN 71


>U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2a protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +3

Query: 324 PTTRLYFAHSNSNFQKKEYRNNRLFEIIHKVVYLQNELYARPSTQWLASRSGHSIRRRPC 503
           PT +L+    N    K+EYR++R  E + + +  Q E+  +   +  A ++ H+  +   
Sbjct: 94  PTLKLF---RNGEAAKREYRSSRSVEALSEFINKQMEVTVKKFIEKNALQAAHNPEKNTF 150

Query: 504 SGY 512
            GY
Sbjct: 151 IGY 153


>U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2b protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +3

Query: 324 PTTRLYFAHSNSNFQKKEYRNNRLFEIIHKVVYLQNELYARPSTQWLASRSGHSIRRRPC 503
           PT +L+    N    K+EYR++R  E + + +  Q E+  +   +  A ++ H+  +   
Sbjct: 94  PTLKLF---RNGEAAKREYRSSRSVEALSEFINKQMEVTVKKFIEKNALQAAHNPEKNTF 150

Query: 504 SGY 512
            GY
Sbjct: 151 IGY 153


>Z81102-1|CAB03202.1|  320|Caenorhabditis elegans Hypothetical
           protein M02B1.3 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -2

Query: 620 VMSTKYMTAKFFTFS--AMLYNTSSIFIHVGSQSCPNLITTT 501
           V+ST  ++ KF  ++  AML   SSIF+H  S    + ++TT
Sbjct: 170 VLSTAVLSKKFLLYAYWAMLMEVSSIFLHTRSILHISKLSTT 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,248,458
Number of Sequences: 27780
Number of extensions: 401800
Number of successful extensions: 1041
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)