Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E15
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311...    31   1.4  
05_05_0038 - 21769936-21770199,21770785-21771198,21771274-217714...    29   3.3  
01_06_1551 - 38200370-38201061,38202071-38202109,38203967-38204897     28   7.6  

>02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,
            3110157-3111444
          Length = 1821

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = -3

Query: 424  RSNKSSSGSRALERTVCSASFPLRAETRCCTGEAVDGSTCG 302
            R   SSS S A  RTV S S+  + +T CCT E   G TCG
Sbjct: 1145 RRASSSSSSLASRRTVASPSW--QNDTDCCTWE---GITCG 1180


>05_05_0038 -
           21769936-21770199,21770785-21771198,21771274-21771434,
           21771544-21771607,21771682-21771864,21772355-21772520,
           21773397-21773528,21775085-21775599
          Length = 632

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +1

Query: 358 AEMMLNKQFALEHGIPTNSCY----SVSPHHSGVYPVHEPLYEAWRKVWDVKVTSTEEYP 525
           AE ++N+QFA E   PT++ Y    S       +  +   + +  R V D +V   +  P
Sbjct: 95  AEDVINRQFAFELSTPTDTMYFIADSEKEKEEWINSIGRSIVQHSRSVTDAEVVDYDSRP 154

Query: 526 HLRP 537
           + +P
Sbjct: 155 NSKP 158


>01_06_1551 - 38200370-38201061,38202071-38202109,38203967-38204897
          Length = 553

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 651 SMPPARIALQQ*RVREQTARLTRQHHHAPVPETAT*SSWS*VRILLRASN 502
           S PP R+ L    +   ++  +R HHHAP P     +S++    +L A N
Sbjct: 2   SPPPLRLLLFLLLLHLPSSLSSRHHHHAPSPSKPAPASYAAPLAVLLACN 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,474,932
Number of Sequences: 37544
Number of extensions: 440849
Number of successful extensions: 1081
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)