Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E14
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54236-10|CAA90986.1|  407|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z54235-12|CAA90977.1|  407|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U50311-14|AAT92080.1|   75|Caenorhabditis elegans Hypothetical p...    29   4.9  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    29   4.9  
AF016444-3|AAN73878.1|  320|Caenorhabditis elegans Serpentine re...    28   8.6  

>Z54236-10|CAA90986.1|  407|Caenorhabditis elegans Hypothetical
           protein C09G9.6 protein.
          Length = 407

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 26/89 (29%), Positives = 38/89 (42%)
 Frame = +3

Query: 492 IRARLVTQATAAHILHARRSPLSKDRMQQNRRNLSQWLQNRKHQLLISTRPLTTNPRFRP 671
           IRA  + + +  H L   R  + +  M  N R  +  L   +H L +  RP T +    P
Sbjct: 188 IRADKLLEVSQRHALADIRDQMEQHIMT-NGRIAAPPLSAIQHPLEMFARPSTPD---EP 243

Query: 672 ATEFLLAGTHHMTARPHMEVPPTEVHXVE 758
           A +  L  T   T  P  E+P  E+H  E
Sbjct: 244 AAKLPLGPTPVSTRGPRYELPTKELHDAE 272


>Z54235-12|CAA90977.1|  407|Caenorhabditis elegans Hypothetical
           protein C09G9.6 protein.
          Length = 407

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 26/89 (29%), Positives = 38/89 (42%)
 Frame = +3

Query: 492 IRARLVTQATAAHILHARRSPLSKDRMQQNRRNLSQWLQNRKHQLLISTRPLTTNPRFRP 671
           IRA  + + +  H L   R  + +  M  N R  +  L   +H L +  RP T +    P
Sbjct: 188 IRADKLLEVSQRHALADIRDQMEQHIMT-NGRIAAPPLSAIQHPLEMFARPSTPD---EP 243

Query: 672 ATEFLLAGTHHMTARPHMEVPPTEVHXVE 758
           A +  L  T   T  P  E+P  E+H  E
Sbjct: 244 AAKLPLGPTPVSTRGPRYELPTKELHDAE 272


>Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical
           protein Y69H2.3d protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 443 CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSL 556
           CR   C  +E CVL +  C     + C   PTC+ K L
Sbjct: 236 CRAQNCPYNEECVLVQVTCI---RAPCNPIPTCRPKDL 270


>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 443 CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSL 556
           CR   C  +E CVL +  C     + C   PTC+ K L
Sbjct: 341 CRAQNCPYNEECVLVQVTCI---RAPCNPIPTCRPKDL 375


>U50311-14|AAT92080.1|   75|Caenorhabditis elegans Hypothetical
           protein C25E10.13 protein.
          Length = 75

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +2

Query: 440 TCRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTC 541
           +C D+ C     C     PC  G T  C T P C
Sbjct: 40  SCEDVKCFGQNSCRTVAPPCIPGKT--CPTQPLC 71


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 443  CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSLVEG 565
            C  + C N++VC+L +  C       C   PTC+K     G
Sbjct: 1805 CEHVECPNAQVCILRKADCP---NKWCLPVPTCEKSPCNSG 1842


>AF016444-3|AAN73878.1|  320|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 11 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 406 YYGEKKNSSLPIHIYLLCTLRLCLNYFQIYSSSILLTISFLNIA 275
           Y   K++S+   + Y  CTL +C+   QI  +S+    SF+N +
Sbjct: 118 YIATKRSSN---YEYSGCTLGICVTMLQILLASVFTFYSFMNFS 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,480,955
Number of Sequences: 27780
Number of extensions: 371007
Number of successful extensions: 1021
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)