Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_E12
(813 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.13c |fps1||geranyltranstransferase Fps1|Schizosaccharom... 206 3e-54
SPBC36.06c |spo9||farnesyl pyrophosphate synthetase|Schizosaccha... 156 4e-39
SPAPB24D3.04c |mag1||DNA-3-methyladenine glycosylase Mag1|Schizo... 32 0.084
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 30 0.45
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 30 0.45
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 29 0.79
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 28 1.8
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 27 2.4
SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces ... 27 3.2
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 27 4.2
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 27 4.2
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 26 5.5
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 26 7.3
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 25 9.7
SPBC577.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.7
SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyce... 25 9.7
SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces p... 25 9.7
>SPAC6F12.13c |fps1||geranyltranstransferase
Fps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 206 bits (503), Expect = 3e-54
Identities = 101/242 (41%), Positives = 145/242 (59%)
Frame = +1
Query: 88 LEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 267
L +N GGK RG++ + +YE+ + E A V GW E+LQ++ ++ DDIMD
Sbjct: 42 LFHNTLGGKYNRGLSVIDSYEIL-LGHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDA 100
Query: 268 SSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTS 447
S TRRG PCWY MP VG AINDA +V +IY +LK +F + Y D++++F++ T
Sbjct: 101 SKTRRGQPCWYLMPGVGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTE 160
Query: 448 MGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIEDI 627
+GQ LD A + D S F+ +++ IV YKT++YS LPV L + L ++
Sbjct: 161 LGQQLDLLTAPEDSVDLSKFSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCA 220
Query: 628 EGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFAX 807
+ I +GK FQ+QDD++DC+G+ TVTGK GTDI KCSW+ AL +C QR +
Sbjct: 221 QDILIILGKYFQVQDDYLDCYGDPTVTGKIGTDILDNKCSWIINLALAKCTPEQRVILDD 280
Query: 808 NY 813
NY
Sbjct: 281 NY 282
>SPBC36.06c |spo9||farnesyl pyrophosphate
synthetase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 351
Score = 156 bits (378), Expect = 4e-39
Identities = 86/242 (35%), Positives = 125/242 (51%)
Frame = +1
Query: 88 LEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 267
++ N GGK RG+ + + E + E R A + GW E+LQ +M DDIMD
Sbjct: 47 IKRNTLGGKNNRGLAVLQSLTSLINRE-LEEAEFRDAALLGWLIEILQGCFLMADDIMDQ 105
Query: 268 SSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTS 447
S RRG+ CWY + V AIN++ L+ I +++ YF Y D+LD F E T
Sbjct: 106 SIKRRGLDCWYLVVGVRR-AINESQLLEACIPLLIRKYFRNMPYYVDLLDTFREVTFLTE 164
Query: 448 MGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIEDI 627
+GQ D + + F +Y I+ YKTS+YS LP+ L+L++N +
Sbjct: 165 LGQQEDLLSSRDGEASLRSFDLMKYDFIITYKTSFYSFYLPIKCALLLSRNSNQKAYDTT 224
Query: 628 EGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFAX 807
+ +G FQ+QDD++DCFG+ TV GK G DIQ KC+WL A + + Q L
Sbjct: 225 IKLSKLLGYYFQVQDDYLDCFGDYTVLGKVGMDIQDNKCTWLVCYAEKFASADQLNLLRA 284
Query: 808 NY 813
+Y
Sbjct: 285 HY 286
>SPAPB24D3.04c |mag1||DNA-3-methyladenine glycosylase
Mag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 228
Score = 32.3 bits (70), Expect = 0.084
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 166 ENVTEEMVRLARVAGWCTEMLQAYLIMNDDIM--DGSSTRRGVPCWYRMPDV 315
E + E + ++ + W EML + + DD+M D S R G +R+P +
Sbjct: 135 EELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKI 186
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 29.9 bits (64), Expect = 0.45
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 156 RETGKRYRRDGEVSTCRRLVYGNAAGVLDNE 248
+E GKR+ + TC RL Y A GV++ +
Sbjct: 545 KEIGKRWFGKTVIKTCARLAYSEAQGVIEGK 575
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 29.9 bits (64), Expect = 0.45
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 298 TSTGPRAGSTTRPLYRRSLS-STPAAFPYTNRRHVLTSPS 182
+S PR G + P+ RS + FPY N+R+ +T+PS
Sbjct: 450 SSEMPRTGMSALPMRPRSQNVDKHRKFPYYNKRNAVTTPS 489
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 29.1 bits (62), Expect = 0.79
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 172 VTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVP 291
+ +RLA++ TEM+ +++DD++D ++ RRG P
Sbjct: 115 ILPSQLRLAQI----TEMIHIASLLHDDVIDHANVRRGSP 150
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 106 GGKKIRGITTV-LAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRR 282
G + GI T+ LA K NV + ++ + +I ++++MD + ++
Sbjct: 181 GANSMVGIATIQLAKHFGYKSINVVRNRPDIEKLKEQLKSLGATIVITDEELMDRKTMKQ 240
Query: 283 GVPCWYRMPDVGLG 324
VP W + +V LG
Sbjct: 241 KVPEWIQGGEVKLG 254
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 433 LLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENA 612
+L S G L +++Y+L+ + Y VK K S+Y + + + LIL RE
Sbjct: 338 ILMDSFGDDLQKLKETYGEEEYNLYLVDPYRYRVKRKESFYDLAVRLE-PLILELGREQR 396
Query: 613 PI 618
+
Sbjct: 397 DV 398
>SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 91 EYNVKGGKK-IRGITTVLAYELFEKPENVTEEMVRL 195
E+++K K+ I+ ITT+L +E F+K V E++ R+
Sbjct: 275 EFSLKLNKRDIKMITTLLQFEGFQKEPVVREQLQRM 310
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 714 FPCNRFVAEAVHEVVLNLKQLADFKTYSFNV 622
FPCN F+ VH V + D+ Y+ N+
Sbjct: 172 FPCNFFIRRGVHLKVNKYTEPLDWSYYAHNL 202
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 353 VLYTKYSRYISGKLKNTQTSWTFSTRLF-SIRAWDNI*ITPWRTATNKTTV 502
V +T+++ +SG + + + FS+ L S+RAWD I +RT T + V
Sbjct: 375 VTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRV 425
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 598 NRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTG 711
N E++ +ED I + + ++D F D ET+TG
Sbjct: 354 NYESSRVEDFWDIQLNVKGMDTLEDSFRDAIQVETLTG 391
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 7.3
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -1
Query: 711 PCNRFVAEAVHEVVLNLKQLADFKTYSFNVFDRRILSVLGKDQAENNRQLDRVIRG--LV 538
P R +AE V V+NL + A+ ++ + ++IL V ++ ++ LD + G ++
Sbjct: 53 PLKRPIAEYVSSGVINLDKPANPSSHEVVAWVKKILRV---EKTGHSGTLDPKVTGCLII 109
Query: 537 FNDRIISLRREQ 502
NDR L + Q
Sbjct: 110 CNDRATRLVKSQ 121
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 391 AKEYADILDIF--NEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKY 540
+K + LD F N+AL S G LDY + H +++ S+ KY
Sbjct: 65 SKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKY 116
>SPBC577.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 239
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 379 YFGKAKEYADILDIFNEALLYTSMGQHLDY-AMAHRNKQDYSLFTTERYYSIVKYKTSYY 555
++G+ ++ L F + LLY + + DY + Q ++ E + KYKT ++
Sbjct: 71 WYGRVSKHTRSLKTFKKGLLYEHIKKEADYDPLVFSAHQLETIIEDEIEIWMYKYKTPWF 130
>SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -2
Query: 278 RVDDPSIISSFIIKYACSISVHQPATRANLTISSVTFSGFSNNS 147
R+D PSI + II ++ S+ V + + + SS T S SNNS
Sbjct: 362 RLDSPSIRKTSIIDHSKSLPVQRASVLPIIKQSSQT-SPVSNNS 404
>SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 208
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +2
Query: 398 NTQTSWTFSTRLFSIRAWDNI*ITPWRTATNKTTVCSRRSDIIRSLNTRPRITRSS 565
N T W + L +IRAW ++ A K + ++ + +L T P + R +
Sbjct: 52 NNPTRWKYERPLETIRAWQDV-------AEGKVPASNEKAARVSNLKTVPSLKREN 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,368,386
Number of Sequences: 5004
Number of extensions: 72612
Number of successful extensions: 216
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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