Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_E12
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 222 1e-57
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 221 2e-57
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 221 2e-57
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 221 2e-57
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 221 2e-57
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 188 2e-47
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 183 8e-46
BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein. 52 2e-06
BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosph... 52 2e-06
AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosph... 52 2e-06
AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl pyropho... 52 2e-06
AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl pyrophos... 52 2e-06
AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl pyrophos... 52 2e-06
AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosph... 52 2e-06
AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein. 52 2e-06
AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase... 32 2.1
BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein. 31 5.0
BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein. 31 5.0
AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase... 31 5.0
AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl... 31 5.0
AB209763-1|BAD93000.1| 297|Homo sapiens trans-prenyltransferase... 31 5.0
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 8.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 8.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 8.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 8.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 8.7
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 222 bits (542), Expect = 1e-57
Identities = 107/243 (44%), Positives = 147/243 (60%)
Frame = +1
Query: 85 VLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMD 264
VLEYN GGK RG+T V+A+ +P + ++ A GWC E+LQA+ ++ DDIMD
Sbjct: 48 VLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMD 107
Query: 265 GSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYT 444
S TRRG CWY+ P VGL AINDA L+ IY +LK+Y + Y +++++F ++ T
Sbjct: 108 SSLTRRGQTCWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQT 167
Query: 445 SMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIED 624
+GQ LD A + D FT +RY SIVKYKT++YS LP+ + + +
Sbjct: 168 EIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHAN 227
Query: 625 IEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFA 804
+ I E+G+ FQIQDD++D FG+ +VTGK GTDIQ KCSWL V LQR Q +
Sbjct: 228 AKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILK 287
Query: 805 XNY 813
NY
Sbjct: 288 ENY 290
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 221 bits (540), Expect = 2e-57
Identities = 107/243 (44%), Positives = 147/243 (60%)
Frame = +1
Query: 85 VLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMD 264
VLEYN GGK RG+T V+A+ +P + ++ A GWC E+LQA+ ++ DDIMD
Sbjct: 41 VLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMD 100
Query: 265 GSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYT 444
S TRRG CWY+ P VGL AINDA L+ IY +LK+Y + Y +++++F ++ T
Sbjct: 101 SSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQT 160
Query: 445 SMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIED 624
+GQ LD A + D FT +RY SIVKYKT++YS LP+ + + +
Sbjct: 161 EIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHAN 220
Query: 625 IEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFA 804
+ I E+G+ FQIQDD++D FG+ +VTGK GTDIQ KCSWL V LQR Q +
Sbjct: 221 AKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILK 280
Query: 805 XNY 813
NY
Sbjct: 281 ENY 283
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 221 bits (540), Expect = 2e-57
Identities = 107/243 (44%), Positives = 147/243 (60%)
Frame = +1
Query: 85 VLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMD 264
VLEYN GGK RG+T V+A+ +P + ++ A GWC E+LQA+ ++ DDIMD
Sbjct: 115 VLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMD 174
Query: 265 GSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYT 444
S TRRG CWY+ P VGL AINDA L+ IY +LK+Y + Y +++++F ++ T
Sbjct: 175 SSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQT 234
Query: 445 SMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIED 624
+GQ LD A + D FT +RY SIVKYKT++YS LP+ + + +
Sbjct: 235 EIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHAN 294
Query: 625 IEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFA 804
+ I E+G+ FQIQDD++D FG+ +VTGK GTDIQ KCSWL V LQR Q +
Sbjct: 295 AKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILK 354
Query: 805 XNY 813
NY
Sbjct: 355 ENY 357
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 221 bits (540), Expect = 2e-57
Identities = 107/243 (44%), Positives = 147/243 (60%)
Frame = +1
Query: 85 VLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMD 264
VLEYN GGK RG+T V+A+ +P + ++ A GWC E+LQA+ ++ DDIMD
Sbjct: 114 VLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMD 173
Query: 265 GSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYT 444
S TRRG CWY+ P VGL AINDA L+ IY +LK+Y + Y +++++F ++ T
Sbjct: 174 SSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQT 233
Query: 445 SMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIED 624
+GQ LD A + D FT +RY SIVKYKT++YS LP+ + + +
Sbjct: 234 EIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHAN 293
Query: 625 IEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFA 804
+ I E+G+ FQIQDD++D FG+ +VTGK GTDIQ KCSWL V LQR Q +
Sbjct: 294 AKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILK 353
Query: 805 XNY 813
NY
Sbjct: 354 ENY 356
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 221 bits (540), Expect = 2e-57
Identities = 107/243 (44%), Positives = 147/243 (60%)
Frame = +1
Query: 85 VLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMD 264
VLEYN GGK RG+T V+A+ +P + ++ A GWC E+LQA+ ++ DDIMD
Sbjct: 114 VLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMD 173
Query: 265 GSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYT 444
S TRRG CWY+ P VGL AINDA L+ IY +LK+Y + Y +++++F ++ T
Sbjct: 174 SSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQT 233
Query: 445 SMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIED 624
+GQ LD A + D FT +RY SIVKYKT++YS LP+ + + +
Sbjct: 234 EIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHAN 293
Query: 625 IEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFA 804
+ I E+G+ FQIQDD++D FG+ +VTGK GTDIQ KCSWL V LQR Q +
Sbjct: 294 AKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILK 353
Query: 805 XNY 813
NY
Sbjct: 354 ENY 356
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 188 bits (459), Expect = 2e-47
Identities = 97/243 (39%), Positives = 135/243 (55%)
Frame = +1
Query: 85 VLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMD 264
VLEYN GGK R +T +A+ P + ++ A GWC E+LQA+ ++ DDIMD
Sbjct: 43 VLEYNAIGGKYNRRLTVAVAFRELVDPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMD 102
Query: 265 GSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYT 444
S TRRG CWY+ P VGL AI+DA L+ IY +LK+Y + Y +++++F ++ T
Sbjct: 103 SSLTRRGQICWYQKPGVGLDAIDDANLLEACIYPLLKLYCREQPYYLNLIELFLQSSYQT 162
Query: 445 SMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIED 624
+GQ LD + D FT +RY SIVKYKT+ S LP+ +
Sbjct: 163 EIGQTLDLLTXPQGNVDLVRFTEKRYISIVKYKTALSSSYLPIAAAXXXXGIVXEKEHAN 222
Query: 625 IEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFA 804
I E+G+ QIQDD+++ FG+ +VTGK GTDIQ KC+ L V L R Q +
Sbjct: 223 AXKILLEMGEFSQIQDDYLELFGDPSVTGKIGTDIQDXKCNCLXVQCLXRATPEQYQILK 282
Query: 805 XNY 813
NY
Sbjct: 283 ENY 285
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 183 bits (445), Expect = 8e-46
Identities = 90/243 (37%), Positives = 138/243 (56%)
Frame = +1
Query: 85 VLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMD 264
VLEYN GGK RG+ ++A+ +P + + ++ A GW ++LQA+ ++ DDIMD
Sbjct: 16 VLEYNAIGGKYHRGLMVLVAFRELVEPRKLDADSLQWAPTVGWYAQLLQAFFLVADDIMD 75
Query: 265 GSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYT 444
S T +G WY+ +GL AINDAIL+ IY +LK+Y + Y +++++F + T
Sbjct: 76 SSLTCQGQISWYQKLGMGLDAINDAILLEACIYCLLKLYCREQPYYLNLMELFQQNSYQT 135
Query: 445 SMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIED 624
+GQ LD + D T +R+ S+VKYKT++YS LPV + +++ +
Sbjct: 136 EIGQTLDLITTPQGNVDLRRCTEKRHKSVVKYKTAFYSFYLPVAAAMYMSRMDDKKEHTS 195
Query: 625 IEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQRCNDAQRTLFA 804
+ I EI + FQIQDD++D G+ +VTG+ G D Q KCSWL V L + Q +
Sbjct: 196 AKKILLEIQEFFQIQDDYLDFSGDPSVTGRVGNDFQDNKCSWLVVQCLLQATPEQYQILK 255
Query: 805 XNY 813
NY
Sbjct: 256 ENY 258
>BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHQDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthetase protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein.
Length = 300
Score = 52.0 bits (119), Expect = 2e-06
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 217 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 393
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 394 KEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV 573
++ D + +F LL GQ LD + +Y+ T E Y ++V KT L V
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLDIYW----RDNYTCPTEEEYKAMVLQKTGGL-FGLAV 160
Query: 574 VLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQXGKCSW 750
L + + + ED++ + +G FQI+DD+ + E K D+ GK S+
Sbjct: 161 GLMQLFSDYK-----EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSF 215
Query: 751 LAVNAL 768
++A+
Sbjct: 216 PTIHAI 221
>AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase
protein.
Length = 376
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 94 YNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSS 273
++VKG K R I VL N + + R EM+ +++DD++D +S
Sbjct: 90 FDVKG-KAFRPIIVVLMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDDAS 148
Query: 274 TRRG 285
+RRG
Sbjct: 149 SRRG 152
>BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein.
Length = 306
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 91 EYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 267
EY G GK R I L N + + R EM+ +++DD++D
Sbjct: 126 EYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDD 185
Query: 268 SSTRRG 285
+S+RRG
Sbjct: 186 ASSRRG 191
>BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 91 EYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 267
EY G GK R I L N + + R EM+ +++DD++D
Sbjct: 125 EYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDD 184
Query: 268 SSTRRG 285
+S+RRG
Sbjct: 185 ASSRRG 190
>AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase
(TPT) protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 91 EYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 267
EY G GK R I L N + + R EM+ +++DD++D
Sbjct: 126 EYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDD 185
Query: 268 SSTRRG 285
+S+RRG
Sbjct: 186 ASSRRG 191
>AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl
diphosphate synthase protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 91 EYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 267
EY G GK R I L N + + R EM+ +++DD++D
Sbjct: 126 EYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDD 185
Query: 268 SSTRRG 285
+S+RRG
Sbjct: 186 ASSRRG 191
>AB209763-1|BAD93000.1| 297|Homo sapiens trans-prenyltransferase
variant protein.
Length = 297
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 91 EYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 267
EY G GK R I L N + + R EM+ +++DD++D
Sbjct: 133 EYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDD 192
Query: 268 SSTRRG 285
+S+RRG
Sbjct: 193 ASSRRG 198
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +2
Query: 470 PWRTATNKTTVCSRRSDIIRSLNTRPRITRSSCRLFSA*SLPRTERMRLSKTLKEYVLKS 649
PW+ + ++ + + R RS + P I+R R ++ R R R S T + ++
Sbjct: 1860 PWKRSRSRASPATHR----RSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA 1915
Query: 650 ASCFKFRTTSWTASATKRLQGKKGPTSXKAS 742
+ + R+ S T T+R + PT+ + S
Sbjct: 1916 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 1946
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +2
Query: 470 PWRTATNKTTVCSRRSDIIRSLNTRPRITRSSCRLFSA*SLPRTERMRLSKTLKEYVLKS 649
PW+ + ++ + + R RS + P I+R R ++ R R R S T + ++
Sbjct: 892 PWKRSRSRASPATHR----RSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA 947
Query: 650 ASCFKFRTTSWTASATKRLQGKKGPTSXKAS 742
+ + R+ S T T+R + PT+ + S
Sbjct: 948 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 978
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +2
Query: 470 PWRTATNKTTVCSRRSDIIRSLNTRPRITRSSCRLFSA*SLPRTERMRLSKTLKEYVLKS 649
PW+ + ++ + + R RS + P I+R R ++ R R R S T + ++
Sbjct: 1860 PWKRSRSRASPATHR----RSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA 1915
Query: 650 ASCFKFRTTSWTASATKRLQGKKGPTSXKAS 742
+ + R+ S T T+R + PT+ + S
Sbjct: 1916 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 1946
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +2
Query: 470 PWRTATNKTTVCSRRSDIIRSLNTRPRITRSSCRLFSA*SLPRTERMRLSKTLKEYVLKS 649
PW+ + ++ + + R RS + P I+R R ++ R R R S T + ++
Sbjct: 383 PWKRSRSRASPATHR----RSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA 438
Query: 650 ASCFKFRTTSWTASATKRLQGKKGPTSXKAS 742
+ + R+ S T T+R + PT+ + S
Sbjct: 439 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 469
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +2
Query: 470 PWRTATNKTTVCSRRSDIIRSLNTRPRITRSSCRLFSA*SLPRTERMRLSKTLKEYVLKS 649
PW+ + ++ + + R RS + P I+R R ++ R R R S T + ++
Sbjct: 1908 PWKRSRSRASPATHR----RSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA 1963
Query: 650 ASCFKFRTTSWTASATKRLQGKKGPTSXKAS 742
+ + R+ S T T+R + PT+ + S
Sbjct: 1964 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 1994
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,341,365
Number of Sequences: 237096
Number of extensions: 2589021
Number of successful extensions: 8930
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8911
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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