Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E12
         (813 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical pr...   149   3e-36
AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical ...    31   0.98 
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    28   9.1  
U80443-7|AAB37678.2|  393|Caenorhabditis elegans Coenzyme q (ubi...    28   9.1  

>Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical
           protein R06C1.2 protein.
          Length = 352

 Score =  149 bits (360), Expect = 3e-36
 Identities = 84/233 (36%), Positives = 137/233 (58%), Gaps = 3/233 (1%)
 Frame = +1

Query: 85  VLEYNVKGGKKIRG---ITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDD 255
           + +  V GGK  R    + T+ A +   + E  T+E+  +   A    E++Q++ ++ DD
Sbjct: 44  LFDNTVIGGKYSRASLCVDTIRALQPHLRDE--TQELQAVCEAAA-TLEIIQSFYLIADD 100

Query: 256 IMDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEAL 435
           IMD S TRRG PCW+R   VG+ AINDA ++   + +IL++          + + + ++ 
Sbjct: 101 IMDNSETRRGKPCWFRREGVGMSAINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSK 160

Query: 436 LYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAP 615
             T +GQ LD +  ++     S FT +RY  +V+ KTS+Y++  P+ + LI++     A 
Sbjct: 161 QKTLIGQFLDTSSVNQ----ISSFTWDRYELMVENKTSHYTVFHPIQMALIISDVL--AY 214

Query: 616 IEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQXGKCSWLAVNALQR 774
              ++ + ++IG LFQ QDDF+D +G+  +TGK GTDIQ GKC+WLAV ALQ+
Sbjct: 215 HGSVKKVAYQIGFLFQSQDDFLDVYGDPKITGKIGTDIQDGKCTWLAVRALQK 267


>AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical
           protein R06B10.2 protein.
          Length = 1014

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +2

Query: 533 LNTRPRITRSSCRLFSA*SLPRTERMRLSKTLKEYVLKSASCFKFRTTSWTA--SATKRL 706
           L+TR R + S+ +L +  SL R+ ++  S    +    SA   +   TS+TA   AT +L
Sbjct: 659 LSTRRRRSASASQLDTLLSLLRSLQIYDSAKFSKAFDDSAKSLQALDTSFTAYSKATSKL 718

Query: 707 QGKKGPTSXKA 739
           QG+KG  S ++
Sbjct: 719 QGQKGSQSPRS 729


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 69  TLKHGTSHNTSLGIKLYGTIGR 4
           +L H T HNT  GI  Y TI R
Sbjct: 115 SLSHSTPHNTYRGISKYSTIER 136


>U80443-7|AAB37678.2|  393|Caenorhabditis elegans Coenzyme q
           (ubiquinone) biosynthesisprotein 1 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 208 GWCTEMLQAYLIMNDDIMDGSSTRRG 285
           G   EM+    +++DD++D ++TRRG
Sbjct: 139 GMIAEMIHTASLVHDDVIDEANTRRG 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,979,818
Number of Sequences: 27780
Number of extensions: 422383
Number of successful extensions: 1171
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)