Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_E11
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 200 7e-52
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.54
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 30 2.2
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 2.9
Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 5.0
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 200 bits (489), Expect = 7e-52
Identities = 111/218 (50%), Positives = 137/218 (62%), Gaps = 4/218 (1%)
Frame = +1
Query: 88 PRXLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTSAER 264
P L N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +ASYT AER
Sbjct: 8 PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67
Query: 265 KTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYAD 438
KTW+ G++P DLFGS L AYA+
Sbjct: 68 KTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEERLAAYAE 115
Query: 439 KKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQ 618
KK+KK IAKSS++LDVKPWDDETD+ EME VR+IEM+GL+WG +KL+P+GYGI KLQ
Sbjct: 116 KKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQ 175
Query: 619 IMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVDIAAFNKI 729
I+ VIED KVSVD L EKI +FED VQSVDI AFNKI
Sbjct: 176 IITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 213
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 151 bits (367), Expect = 4e-37
Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +1
Query: 358 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 537
DLFGS L AYA KK+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 538 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVDIA 714
VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI +FED VQSVDI
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIV 258
Query: 715 AFNKI 729
AFNKI
Sbjct: 259 AFNKI 263
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -2
Query: 280 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 122
P + C QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 475 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSV 654
SI+L VKP DDE ++++ NQ M G LW A++ Y ++ I V V
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSYVCVRVLKFLYIMCKSVLV 489
Query: 655 DLLTEK 672
+T K
Sbjct: 490 HFITPK 495
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 550 EMEGLLWGASKLVPVGYGINKLQIMC----VIEDDKVSVDLLTEKIQEFEDFVQ 699
E E L G+ LVPV N+LQI+C DD V + T + E D ++
Sbjct: 14 EDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDSIR 67
>Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical
protein T09E8.4 protein.
Length = 406
Score = 28.7 bits (61), Expect = 5.0
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = -3
Query: 525 FLHIGFIIPWLDIKENRGLGNESWFLRLLV-SICFQTFFSNSFSFCILFLVTRTK*INVV 349
FL+I I +K++ NE +R+LV +I FF S S +FL+ +T N
Sbjct: 291 FLYIAVIFKIFAMKKSTLNKNE---IRVLVQAIVIFVFFQASSS---VFLICQTIAFNTA 344
Query: 348 VIVVFRCWGGSRGFSTGGQWAGALRPCFAFSRSV*SNLIIPS*YVGKVSGRRLANLL 178
V + R +T +AGA PCF+F S ++ S + VS + +NL+
Sbjct: 345 TAFVIK-----RIINTLEIFAGAATPCFSFFTSKEIRKLLSS-KIAAVSSQGSSNLV 395
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 280 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 122
P + C QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,910
Number of Sequences: 27780
Number of extensions: 333572
Number of successful extensions: 969
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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