Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E06
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    27   0.20 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    27   0.20 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   5.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.9  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 410 HRSFLQKVFVSKS*LSQDRNMCNSRVCKHRCGDGVAHDRRAAV 282
           H   L  +F  +S      N  N    +++C  G+A+DR A V
Sbjct: 94  HCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAYDREARV 136


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 410 HRSFLQKVFVSKS*LSQDRNMCNSRVCKHRCGDGVAHDRRAAV 282
           H   L  +F  +S      N  N    +++C  G+A+DR A V
Sbjct: 94  HCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAYDREARV 136


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 139 TLALYTCKLRLW 174
           +L  YTC+L+LW
Sbjct: 49  SLKQYTCELKLW 60


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 668 NIWCSFYLSWTLV 706
           N WCS Y+ W  V
Sbjct: 486 NNWCSPYIGWQKV 498


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 51 SLVPLAQPPHHPA 89
          S  PL  PPH+PA
Sbjct: 14 STSPLLTPPHNPA 26


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 677 CSFYLSWTLV 706
           CSFY  WT V
Sbjct: 288 CSFYSDWTRV 297


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 91  WCWIPMVVPWI 123
           WCWI  +  W+
Sbjct: 134 WCWIVEIGGWL 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,273
Number of Sequences: 336
Number of extensions: 2265
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)