Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E06
         (713 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027865-1|AAH27865.1|  404|Homo sapiens C11orf16 protein protein.     33   1.3  
AK223377-1|BAD97097.1|  467|Homo sapiens chromosome 11 open read...    33   1.3  
AJ400877-5|CAB92289.1|  467|Homo sapiens C11orf16 protein protein.     33   1.3  
D86980-1|BAA13216.1|  336|Homo sapiens KIAA0227 protein.               31   3.1  
BC047950-1|AAH47950.1|  277|Homo sapiens TTC9 protein protein.         31   3.1  
BC006982-1|AAH06982.1|  334|Homo sapiens arginine/serine-rich co...    30   7.2  
EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.             30   9.5  
AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.              30   9.5  
AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.     30   9.5  

>BC027865-1|AAH27865.1|  404|Homo sapiens C11orf16 protein protein.
          Length = 404

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +2

Query: 311 HHHTCAYTLCY-CTCSCPDSINSW 379
           HHH C   LC  C C CP    +W
Sbjct: 269 HHHACCQLLCQGCLCGCPPCGTTW 292


>AK223377-1|BAD97097.1|  467|Homo sapiens chromosome 11 open reading
           frame 16 variant protein.
          Length = 467

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +2

Query: 311 HHHTCAYTLCY-CTCSCPDSINSW 379
           HHH C   LC  C C CP    +W
Sbjct: 269 HHHACCQLLCQGCLCGCPPCGTTW 292


>AJ400877-5|CAB92289.1|  467|Homo sapiens C11orf16 protein protein.
          Length = 467

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +2

Query: 311 HHHTCAYTLCY-CTCSCPDSINSW 379
           HHH C   LC  C C CP    +W
Sbjct: 269 HHHACCQLLCQGCLCGCPPCGTTW 292


>D86980-1|BAA13216.1|  336|Homo sapiens KIAA0227 protein.
          Length = 336

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 231 RLSGRQARRQRALDGRRDAPEP*LAGVERER**PPL-YPGDDHGDPAPAQDGEAVAP 64
           R  G +  R+ +  G +  P P  AG E +R  PPL  PG   G PA  Q G A  P
Sbjct: 109 RRGGGRMERKGSAAGAKGNPSPPAAG-EGQRPPPPLCVPGGGGGAPARGQVGAAAEP 164


>BC047950-1|AAH47950.1|  277|Homo sapiens TTC9 protein protein.
          Length = 277

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 231 RLSGRQARRQRALDGRRDAPEP*LAGVERER**PPL-YPGDDHGDPAPAQDGEAVAP 64
           R  G +  R+ +  G +  P P  AG E +R  PPL  PG   G PA  Q G A  P
Sbjct: 50  RRGGGRMERKGSAAGAKGNPSPPAAG-EGQRPPPPLCVPGGGGGAPARGQVGAAAEP 105


>BC006982-1|AAH06982.1|  334|Homo sapiens arginine/serine-rich
           coiled-coil 1 protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -1

Query: 662 GPKSRERRNSVSYDXWXRMYXYTRLMRHGSWSHCDYRSXYSMSYKGGSHGVSQNRGNHSM 483
           G KSR +  S S D   R + Y R  RH S S   Y S    S +  S G  ++      
Sbjct: 41  GRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRS-RSRSRGRGKSYRVQRS 99

Query: 482 GHQSRLRNNVNACLMGNS*RSNQ--SHR 405
             +SR R + +   + +  RS++  SHR
Sbjct: 100 RSKSRTRRSRSRPRLRSHSRSSERSSHR 127


>EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.
          Length = 1255

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = -1

Query: 551 SXYSMSYKGGSHG--VSQNRGNHSMGHQSRLRNNVNACLMGN--S*RSNQSHRSFLQK 390
           S Y      GSH   +SQ   + S GH+   R     C  GN    RS+ SH S  QK
Sbjct: 480 SGYGSLGSNGSHEHLMSQTSSSDSNGHEDSRRRRAEICKNGNKTKNRSHYSHESGEQK 537


>AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.
          Length = 1255

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = -1

Query: 551 SXYSMSYKGGSHG--VSQNRGNHSMGHQSRLRNNVNACLMGN--S*RSNQSHRSFLQK 390
           S Y      GSH   +SQ   + S GH+   R     C  GN    RS+ SH S  QK
Sbjct: 480 SGYGSLGSNGSHEHLMSQTSSSDSNGHEDSRRRRAEICKNGNKTKNRSHYSHESGEQK 537


>AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.
          Length = 1281

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = -1

Query: 551 SXYSMSYKGGSHG--VSQNRGNHSMGHQSRLRNNVNACLMGN--S*RSNQSHRSFLQK 390
           S Y      GSH   +SQ   + S GH+   R     C  GN    RS+ SH S  QK
Sbjct: 506 SGYGSLGSNGSHEHLMSQTSSSDSNGHEDSRRRRAEICKNGNKTKNRSHYSHESGEQK 563


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,601,540
Number of Sequences: 237096
Number of extensions: 1562160
Number of successful extensions: 5230
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5227
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)