Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E06
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p pro...    34   0.17 
AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-P...    34   0.17 
AY071564-1|AAL49186.1|  124|Drosophila melanogaster RE63063p pro...    31   1.2  
AY071377-1|AAL48999.1|  131|Drosophila melanogaster RE40431p pro...    31   1.2  
AE014296-2696|AAF49492.1|  131|Drosophila melanogaster CG13060-P...    31   1.2  
AE014296-2695|AAF49493.1|  124|Drosophila melanogaster CG13041-P...    31   1.2  
AE014296-2698|AAF49490.1|  185|Drosophila melanogaster CG13040-P...    30   2.7  
BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p pro...    30   3.6  
BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p pro...    30   3.6  
AY069522-1|AAL39667.1|  551|Drosophila melanogaster LD23843p pro...    30   3.6  
AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB...    30   3.6  
AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA...    30   3.6  
AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p pro...    29   6.3  
AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.     29   6.3  
AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA...    29   6.3  
AY061158-1|AAL28706.1|  180|Drosophila melanogaster LD12613p pro...    29   8.3  
AE014296-371|AAF47580.1|  180|Drosophila melanogaster CG1919-PA ...    29   8.3  

>BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p
           protein.
          Length = 155

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
 Frame = +3

Query: 258 SHQSRVDIHSSPAIVSHAITTPVLTHSAIAHVPVLTQSTLGH--EHFLKKRSVALVAPSA 431
           SHQS   +HS+P +    +  PV+  +A+   PVL  + +            +A  AP A
Sbjct: 57  SHQSLTQVHSTPVV--EDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPVA 114

Query: 432 VSHQARVDVISKPTL----VSHAVIAPILRHS 515
            S  A     S P      +S+A  AP+L H+
Sbjct: 115 YSSYAAPLTYSAPVAYSAPLSYAAPAPLLHHA 146


>AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-PA
           protein.
          Length = 155

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
 Frame = +3

Query: 258 SHQSRVDIHSSPAIVSHAITTPVLTHSAIAHVPVLTQSTLGH--EHFLKKRSVALVAPSA 431
           SHQS   +HS+P +    +  PV+  +A+   PVL  + +            +A  AP A
Sbjct: 57  SHQSLTQVHSTPVV--EDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPVA 114

Query: 432 VSHQARVDVISKPTL----VSHAVIAPILRHS 515
            S  A     S P      +S+A  AP+L H+
Sbjct: 115 YSSYAAPLTYSAPVAYSAPLSYAAPAPLLHHA 146


>AY071564-1|AAL49186.1|  124|Drosophila melanogaster RE63063p
           protein.
          Length = 124

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 381 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 509
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>AY071377-1|AAL48999.1|  131|Drosophila melanogaster RE40431p
           protein.
          Length = 131

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 381 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 509
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>AE014296-2696|AAF49492.1|  131|Drosophila melanogaster CG13060-PA
           protein.
          Length = 131

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 381 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 509
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>AE014296-2695|AAF49493.1|  124|Drosophila melanogaster CG13041-PA
           protein.
          Length = 124

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 381 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 509
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>AE014296-2698|AAF49490.1|  185|Drosophila melanogaster CG13040-PA
           protein.
          Length = 185

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
 Frame = +3

Query: 291 PAIVSHAITTPVLTHSA-----IAHVPVLTQSTLGHE--HFLKKRSVALVAPSAVSHQAR 449
           P +   A   PV+ H A     I  VPV+   T      H +    V    P AVSHQ+ 
Sbjct: 92  PVVKQVAPIVPVVKHVAPVVPVIKTVPVVHHQTYVAPAVHHVAAVPVVKALPHAVSHQSH 151

Query: 450 VDVISKPTLVSHAVIAPILR 509
             V  + T+++  V+AP+++
Sbjct: 152 TQVHHQKTIIT-PVVAPVVK 170


>BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p
           protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 261 AIRRQVLQQERLSGRQARRQRALDGRRDAPEP*LAGVERE 142
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p
           protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 261 AIRRQVLQQERLSGRQARRQRALDGRRDAPEP*LAGVERE 142
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>AY069522-1|AAL39667.1|  551|Drosophila melanogaster LD23843p
           protein.
          Length = 551

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 261 AIRRQVLQQERLSGRQARRQRALDGRRDAPEP*LAGVERE 142
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 102 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 141


>AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB,
           isoform B protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 261 AIRRQVLQQERLSGRQARRQRALDGRRDAPEP*LAGVERE 142
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA,
           isoform A protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 261 AIRRQVLQQERLSGRQARRQRALDGRRDAPEP*LAGVERE 142
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 129 PLYPGDDHGDPAPAQDGEAVAPMAPKNRR 43
           P  P D   DPA A+  E   P+APK +R
Sbjct: 181 PGTPSDKKEDPAAAETTEEEGPVAPKKKR 209


>AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 129 PLYPGDDHGDPAPAQDGEAVAPMAPKNRR 43
           P  P D   DPA A+  E   P+APK +R
Sbjct: 181 PGTPSDKKEDPAAAETTEEEGPVAPKKKR 209


>AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 129 PLYPGDDHGDPAPAQDGEAVAPMAPKNRR 43
           P  P D   DPA A+  E   P+APK +R
Sbjct: 181 PGTPSDKKEDPAAAETTEEEGPVAPKKKR 209


>AY061158-1|AAL28706.1|  180|Drosophila melanogaster LD12613p
           protein.
          Length = 180

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 282 HSSPAIVSHAITTPVLTHSAIAHVPVL 362
           H++PA+V+HA   P + H+A A+ P +
Sbjct: 119 HAAPAVVAHA--APAVVHAAPAYAPAI 143


>AE014296-371|AAF47580.1|  180|Drosophila melanogaster CG1919-PA
           protein.
          Length = 180

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 282 HSSPAIVSHAITTPVLTHSAIAHVPVL 362
           H++PA+V+HA   P + H+A A+ P +
Sbjct: 119 HAAPAVVAHA--APAVVHAAPAYAPAI 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,157,015
Number of Sequences: 53049
Number of extensions: 491083
Number of successful extensions: 2112
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)