Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E05
         (533 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.49 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.49 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          25   0.49 
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   2.6  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   4.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   6.0  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   7.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   7.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -1

Query: 323 VWIKLFTCDNYFSSLHCKQSTINTKTNIQSWMKTSGSLSS*HMSRLNKMPILY 165
           V I+  T D   +     +S +N   +IQS  K   ++      RLN  P  Y
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY 500


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -1

Query: 323 VWIKLFTCDNYFSSLHCKQSTINTKTNIQSWMKTSGSLSS*HMSRLNKMPILY 165
           V I+  T D   +     +S +N   +IQS  K   ++      RLN  P  Y
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY 500


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -1

Query: 323 VWIKLFTCDNYFSSLHCKQSTINTKTNIQSWMKTSGSLSS*HMSRLNKMPILY 165
           V I+  T D   +     +S +N   +IQS  K   ++      RLN  P  Y
Sbjct: 74  VSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY 126


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 467 SSLIQNYLHFINKFKSLMLGLWYNIV 390
           SSL    +H  N +K+    L+YNI+
Sbjct: 316 SSLSNKTIHNNNNYKNYNKKLYYNII 341


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -1

Query: 407 LWYNI--VIFFIDGLVIAPFVHPLDPSV 330
           L+Y +  ++  I G+V+   +HP DP +
Sbjct: 140 LYYTVTTILAAIVGIVMVLIIHPGDPRI 167


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 473 NFSSLIQNYLHFINKFKSLMLGLWYNI 393
           N+++   NY ++ N + +    L+YNI
Sbjct: 329 NYNNNYNNYNNYNNNYNNNYKKLYYNI 355


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 152 VLWFYFTISILRTTSGFF 99
           V+W + T   LRT S  F
Sbjct: 78  VIWIFSTSKSLRTPSNMF 95


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 351 YKGRYDQTIYKKYYNVI 401
           Y   Y+    K YYN+I
Sbjct: 343 YNNNYNNNCKKLYYNII 359


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 152 VLWFYFTISILRTTSGFF 99
           V+W + T   LRT S  F
Sbjct: 78  VIWIFSTSKSLRTPSNMF 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,452
Number of Sequences: 438
Number of extensions: 3393
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)