Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_E04
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 287 CCVSSRPNLFLIIILCLEYLS 225
           CC     N+ L+ +LCL+Y +
Sbjct: 183 CCAFIFFNMHLLFLLCLDYFT 203



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 451 KVIYFFCKSICVLLYVI*ILCA 386
           ++ YF+C SI   ++++ +LC+
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCS 76



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 448 VIYFFCKSICVLLYVI*ILCALDF 377
           + YF+C  I   ++++ +LC   F
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHF 169


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 112 MYLRYYLNDKGDREYTLATIDPFG 183
           +Y  +Y++DK  R  +L  +D  G
Sbjct: 179 LYYSFYISDKAARPRSLQFVDSEG 202


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -2

Query: 266 NLFLIIILCLEYLSSGE--KRAGCADNVGFPNG 174
           NL ++   C  Y   G   K  GC+DN GF  G
Sbjct: 6   NLGIMHRHCFGYPFQGTTYKYTGCSDNDGFLPG 38


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 715 FETAFILHNHKKRYCNKK 662
           F T+ I  N  + YCNKK
Sbjct: 85  FMTSQIKKNVTRAYCNKK 102


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 715 FETAFILHNHKKRYCNKK 662
           F T+ I  N  + YCNKK
Sbjct: 85  FMTSQIKKNVTRAYCNKK 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,596
Number of Sequences: 336
Number of extensions: 3765
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)