Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_E01
(753 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 276 4e-73
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 258 1e-67
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 257 2e-67
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 253 3e-66
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 249 5e-65
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 248 1e-64
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 237 2e-61
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 237 2e-61
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 233 3e-60
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 230 3e-59
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 221 1e-56
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 216 4e-55
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 214 2e-54
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 211 1e-53
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 211 1e-53
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 204 1e-51
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 202 6e-51
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 202 1e-50
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 201 2e-50
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 192 1e-47
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 187 3e-46
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 187 3e-46
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 186 4e-46
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 185 1e-45
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 182 8e-45
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 180 3e-44
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 174 2e-42
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 171 2e-41
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 163 3e-39
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 161 2e-38
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 160 3e-38
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 160 3e-38
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 157 3e-37
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 154 2e-36
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 142 6e-33
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 133 5e-30
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 132 7e-30
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 130 4e-29
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 129 8e-29
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 124 3e-27
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 120 5e-26
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 119 9e-26
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 116 6e-25
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 115 1e-24
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 114 2e-24
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 114 3e-24
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 113 6e-24
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 113 6e-24
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 112 8e-24
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 112 1e-23
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 111 2e-23
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 111 2e-23
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 110 3e-23
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 107 4e-22
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 105 9e-22
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 105 2e-21
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 104 2e-21
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 102 8e-21
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 102 1e-20
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 101 3e-20
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 95 2e-18
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 94 3e-18
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 94 4e-18
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 94 4e-18
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 93 5e-18
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 93 9e-18
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 93 9e-18
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 91 3e-17
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 91 3e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 90 5e-17
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 90 6e-17
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 89 1e-16
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 88 2e-16
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 88 2e-16
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 88 3e-16
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 87 4e-16
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 87 6e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 86 8e-16
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 84 3e-15
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 84 4e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 3e-14
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 80 5e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 79 9e-14
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 79 1e-13
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 78 2e-13
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 78 3e-13
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 78 3e-13
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 78 3e-13
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 75 2e-12
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 74 3e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 1e-11
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 72 1e-11
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 69 1e-10
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 61 2e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 57 4e-07
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 47 4e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 47 6e-04
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 42 0.016
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 42 0.022
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 41 0.029
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.050
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 39 0.15
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 38 0.20
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 37 0.61
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 37 0.61
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 36 1.1
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 35 1.9
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 35 2.5
UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=... 35 2.5
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 10.0
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 10.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 276 bits (677), Expect = 4e-73
Identities = 145/240 (60%), Positives = 154/240 (64%)
Frame = +2
Query: 2 RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAX 181
RK +YSTNHKDIGTLY RAELG PGSLIGDDQIYNTIVTAHA
Sbjct: 1 RKWLYSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAF 60
Query: 182 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 361
N LVPL+LGAPD+AFPR+NN+ F IVENGAG
Sbjct: 61 IMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAG 120
Query: 362 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 541
TG TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PL
Sbjct: 121 TGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPL 180
Query: 542 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 721
FV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 181 FVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 258 bits (631), Expect = 1e-67
Identities = 136/247 (55%), Positives = 151/247 (61%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
++STNHKDIGTLY RAELG PG+L+GDDQIYN IVTAHA
Sbjct: 8 LFSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMI 67
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N LVPL++GAPD+AFPR+NN+ F VE GAGTG
Sbjct: 68 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGW 127
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
TVYPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV
Sbjct: 128 TVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVW 187
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 731 IXPGFGI 751
I PGFG+
Sbjct: 248 ILPGFGM 254
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 257 bits (630), Expect = 2e-67
Identities = 133/210 (63%), Positives = 141/210 (67%)
Frame = +2
Query: 104 RAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 283
R ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 11 RTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRM 70
Query: 284 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 463
NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 71 NNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISS 130
Query: 464 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 643
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNT
Sbjct: 131 ILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNT 190
Query: 644 SFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
SFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 191 SFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 253 bits (620), Expect = 3e-66
Identities = 133/246 (54%), Positives = 147/246 (59%)
Frame = +2
Query: 14 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXX 193
+STNHKDIGTLY RAEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
VYPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV A
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWA 187
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILI 247
Query: 734 XPGFGI 751
PGFGI
Sbjct: 248 LPGFGI 253
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 249 bits (610), Expect = 5e-65
Identities = 130/246 (52%), Positives = 147/246 (59%)
Frame = +2
Query: 14 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXX 193
+STNHKDIGTLY RAEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
VYPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWS 187
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILI 247
Query: 734 XPGFGI 751
PGFG+
Sbjct: 248 LPGFGM 253
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 248 bits (607), Expect = 1e-64
Identities = 129/247 (52%), Positives = 148/247 (59%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
++STNHKDIGTLY RAELG PG+L+G+D IYN IVTAHA
Sbjct: 7 LFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMI 66
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG
Sbjct: 67 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGW 126
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
TVYPPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV
Sbjct: 127 TVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVW 186
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 731 IXPGFGI 751
I PGFG+
Sbjct: 247 ILPGFGM 253
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 237 bits (581), Expect = 2e-61
Identities = 127/249 (51%), Positives = 144/249 (57%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVY
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVY 244
Query: 725 ILIXPGFGI 751
ILI PGFG+
Sbjct: 245 ILIIPGFGM 253
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 237 bits (580), Expect = 2e-61
Identities = 123/249 (49%), Positives = 146/249 (58%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYNTIVTAHAXX 184
++STNHKDIGTLY R EL PG I G+ Q+YN ++TAHA
Sbjct: 8 LFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFL 67
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N VP+++GAPD+AFPR+NNI F +VE G+GT
Sbjct: 68 MIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGT 127
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPLF
Sbjct: 128 GWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLF 187
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVY
Sbjct: 188 VWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVY 247
Query: 725 ILIXPGFGI 751
ILI PGFGI
Sbjct: 248 ILILPGFGI 256
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 233 bits (570), Expect = 3e-60
Identities = 126/219 (57%), Positives = 146/219 (66%)
Frame = -1
Query: 696 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 517
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 516 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 337
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 336 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 157
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 156 L*I*SSPINDPGFPNSARIKXLKDVPIIPDQIPKIKYNV 40
L I S PI PG PNSARIK L DVP +P PK+KYNV
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 230 bits (562), Expect = 3e-59
Identities = 121/249 (48%), Positives = 146/249 (58%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
I+STNHKDIGTLY R EL P + L+G+ QIYN ++TAHA
Sbjct: 13 IFSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFL 72
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVP+++G+PD+AFPR+NNI F +VE G GT
Sbjct: 73 MIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGT 132
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLSS +H G +VDLAIFSLH++G SS S ++PLF
Sbjct: 133 GWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLF 192
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVY
Sbjct: 193 VWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVY 252
Query: 725 ILIXPGFGI 751
ILI PGFG+
Sbjct: 253 ILILPGFGM 261
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 221 bits (541), Expect = 1e-56
Identities = 114/216 (52%), Positives = 133/216 (61%)
Frame = +2
Query: 104 RAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 283
R ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 22 RLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
Query: 284 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 463
NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 82 NNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
Query: 464 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 643
+ D++ LF +V ITA AGAIT+LLTDRN+NT
Sbjct: 142 IMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNT 201
Query: 644 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 751
SFFDP+GGGDPILYQHLF FFGHPEVYILI PGFGI
Sbjct: 202 SFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGI 237
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 216 bits (528), Expect = 4e-55
Identities = 113/232 (48%), Positives = 133/232 (57%)
Frame = +2
Query: 14 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXX 193
+S NHKDIG+LY R EL +PGS++GDD +YN IVTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
N VPL++GAPD+AFPR+NNI F +VE GAGTG T
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWT 128
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
VYPPL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +
Sbjct: 129 VYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWS 188
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 709
V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 189 VLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 214 bits (523), Expect = 2e-54
Identities = 117/249 (46%), Positives = 137/249 (55%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDI LY R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N L+PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVY
Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVY 245
Query: 725 ILIXPGFGI 751
ILI PGFGI
Sbjct: 246 ILIIPGFGI 254
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 211 bits (516), Expect = 1e-53
Identities = 115/249 (46%), Positives = 136/249 (54%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDI +Y R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N ++PL++GA D++FPRIN+I F +VE+GAGT
Sbjct: 66 MIFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLSS AH G SVDLAIFSLHL ISS S ++PLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLF 185
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVY
Sbjct: 186 VWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVY 245
Query: 725 ILIXPGFGI 751
ILI PGFGI
Sbjct: 246 ILIIPGFGI 254
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 211 bits (516), Expect = 1e-53
Identities = 116/246 (47%), Positives = 133/246 (54%), Gaps = 1/246 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 193
S+N KDIG LY R EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
N L+PL LG PD+ FPR+NNI + +ENG GTG T
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWT 128
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
+YPPLS +H G SVDLAIF LHL+GISS +L LF A
Sbjct: 129 LYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWA 188
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
V ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI
Sbjct: 189 VVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILI 248
Query: 734 XPGFGI 751
PGFGI
Sbjct: 249 IPGFGI 254
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 204 bits (499), Expect = 1e-51
Identities = 112/231 (48%), Positives = 128/231 (55%), Gaps = 2/231 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 697
V A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 202 bits (494), Expect = 6e-51
Identities = 106/198 (53%), Positives = 119/198 (60%)
Frame = +2
Query: 104 RAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 283
R ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 21 RVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRL 80
Query: 284 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 463
NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 81 NNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
Query: 464 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 643
+ + LFV +V ITA AGAIT+LLTDRN NT
Sbjct: 141 ILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNT 200
Query: 644 SFFDPAGGGDPILYQHLF 697
SFFDPAGGGDPILYQHLF
Sbjct: 201 SFFDPAGGGDPILYQHLF 218
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 202 bits (492), Expect = 1e-50
Identities = 109/246 (44%), Positives = 131/246 (53%), Gaps = 1/246 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 193
S+N KDI LY R EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWT 154
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
+YPPLS +H VDL IF LHL+GISS +L LF A
Sbjct: 155 LYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWA 214
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
V ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI
Sbjct: 215 VVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILI 274
Query: 734 XPGFGI 751
PGFGI
Sbjct: 275 IPGFGI 280
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 201 bits (490), Expect = 2e-50
Identities = 109/249 (43%), Positives = 126/249 (50%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
I++TNHK IG LY R EL PG L G+ YN I T H
Sbjct: 9 IFTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVL 68
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N VP+++GAPD++FPR+NN F E G GT
Sbjct: 69 MLFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGT 128
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLSS +H G SVDL IFS HL GI S LPLF
Sbjct: 129 GWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLF 188
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVY
Sbjct: 189 VWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVY 248
Query: 725 ILIXPGFGI 751
ILI PGFG+
Sbjct: 249 ILILPGFGL 257
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 192 bits (467), Expect = 1e-47
Identities = 109/250 (43%), Positives = 131/250 (52%), Gaps = 5/250 (2%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 193
STN KDIGTLY R EL PG I ++Q+YN+I+TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
N L+PL++G PD+AFPR+NNI F I+E G GTG T
Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWT 156
Query: 374 V----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 541
+ YPPLS +H G SVDLAIF+LHL+G+SS +L L
Sbjct: 157 LLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLAL 216
Query: 542 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 721
F + IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEV
Sbjct: 217 F-------GWATWSSRSRYFLGITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEV 269
Query: 722 YILIXPGFGI 751
YILI PGFGI
Sbjct: 270 YILIIPGFGI 279
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 187 bits (455), Expect = 3e-46
Identities = 99/249 (39%), Positives = 134/249 (53%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELG--NPGSLIGDDQIYNTIVTAHAXX 184
++STN ++I LY R EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVY
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVY 262
Query: 725 ILIXPGFGI 751
ILI P FG+
Sbjct: 263 ILIVPVFGV 271
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 187 bits (455), Expect = 3e-46
Identities = 99/249 (39%), Positives = 134/249 (53%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELG--NPGSLIGDDQIYNTIVTAHAXX 184
++STN ++I LY R EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVY
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVY 262
Query: 725 ILIXPGFGI 751
ILI P FG+
Sbjct: 263 ILIVPVFGV 271
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 186 bits (454), Expect = 4e-46
Identities = 105/243 (43%), Positives = 127/243 (52%), Gaps = 2/243 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDI LY R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N L+PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVAT 245
Query: 725 ILI 733
I++
Sbjct: 246 IIM 248
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 185 bits (450), Expect = 1e-45
Identities = 113/265 (42%), Positives = 135/265 (50%), Gaps = 20/265 (7%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-------SLIGD------DQIY- 154
STNHKDIGTLY RAEL PG + D DQ Y
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92
Query: 155 --NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 328
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 329 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 496
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 497 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 676
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDP 271
Query: 677 ILYQHLF*FFGHPEVYILIXPGFGI 751
LYQHLF FFGHPEVYI+I PGFGI
Sbjct: 272 ELYQHLFWFFGHPEVYIMILPGFGI 296
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 182 bits (443), Expect = 8e-45
Identities = 101/211 (47%), Positives = 114/211 (54%)
Frame = +2
Query: 26 HKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 205
HKDIGTLY RAEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 206 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 385
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 386 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 565
L+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 566 AFXXXXXXXXXAGAITILLTDRNLNTSFFDP 658
A A IT+LLTDRNLNT+FFDP
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 180 bits (438), Expect = 3e-44
Identities = 100/235 (42%), Positives = 123/235 (52%), Gaps = 2/235 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDI LY R EL PG L G++Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAIL 65
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N ++PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPLF
Sbjct: 126 GWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 709
V A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 186 VWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 174 bits (424), Expect = 2e-42
Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 2/218 (0%)
Frame = +2
Query: 104 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 277
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 278 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 457
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 458 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 637
SS + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNF 321
Query: 638 NTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 751
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+I P FG+
Sbjct: 322 GTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGV 359
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 171 bits (416), Expect = 2e-41
Identities = 97/242 (40%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
++STN KDI LY R EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N L+PL+LGA D+AF R+NNI F +VE GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF
Sbjct: 131 GWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLF 190
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV
Sbjct: 191 AWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVK 250
Query: 725 IL 730
I+
Sbjct: 251 II 252
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 163 bits (397), Expect = 3e-39
Identities = 91/245 (37%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELG--NPGSLIGDDQIYNTIVTAHAXX 184
++STN ++I LY R EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PE 718
V +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPI 262
Query: 719 VYILI 733
+ I+I
Sbjct: 263 IIIII 267
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 161 bits (390), Expect = 2e-38
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +2
Query: 245 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 424
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 425 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 604
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 605 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 712
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 160 bits (389), Expect = 3e-38
Identities = 87/246 (35%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
S NHKDIGT+Y R EL +PG + +Y++I+T HA
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
N +PL++ D++ PR+NN+ + G G G T+
Sbjct: 71 FVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTM 130
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*A 553
YPPLS++ G +DLA+FSLH+AG+SS F L P+ +
Sbjct: 131 YPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWT 190
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
+ T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILI
Sbjct: 191 LFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILI 250
Query: 734 XPGFGI 751
P FG+
Sbjct: 251 LPAFGV 256
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 160 bits (389), Expect = 3e-38
Identities = 88/249 (35%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
I + NHK IGT Y R EL +PG G Q+YN+++T H
Sbjct: 16 INTVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVL 75
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N ++PL+LGAP++AFPR+N + F + G G+
Sbjct: 76 MIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGS 135
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
T YPPLS S+D I LH GI S + DQ+ +F
Sbjct: 136 SWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMF 194
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY
Sbjct: 195 VWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVY 254
Query: 725 ILIXPGFGI 751
++I P FGI
Sbjct: 255 VIILPVFGI 263
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 157 bits (381), Expect = 3e-37
Identities = 92/249 (36%), Positives = 128/249 (51%), Gaps = 2/249 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELG--NPGSLIGDDQIYNTIVTAHAXX 184
++STN ++I LY R EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VL 259
Query: 725 ILIXPGFGI 751
ILI GI
Sbjct: 260 ILIWLTSGI 268
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 154 bits (374), Expect = 2e-36
Identities = 87/247 (35%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELG--NPGSLIGDDQIYNTIVTAHAXXXX 190
S +HK IG Y R EL G L GD Q YN ++T+H
Sbjct: 10 SVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMV 69
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N +P++ G PD+ FPR+NN+ F + E G G G
Sbjct: 70 FAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGW 129
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
T+YP L H + D +F++HL GISS SF LF+
Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIW 189
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI+
Sbjct: 190 AALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYII 249
Query: 731 IXPGFGI 751
+ P FG+
Sbjct: 250 LLPVFGL 256
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 142 bits (345), Expect = 6e-33
Identities = 84/200 (42%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 365 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 545 V*AVGITAFXXXXXXXXXAG 604
V A+ +TA AG
Sbjct: 185 VWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 133 bits (321), Expect = 5e-30
Identities = 80/251 (31%), Positives = 114/251 (45%), Gaps = 4/251 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDDQI--YNTIVTAHAX 181
I + NHK +G Y R EL + +I + + YN I T H
Sbjct: 9 ITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGI 68
Query: 182 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 361
N +P++ G+P++A+PRIN+I E G G
Sbjct: 69 IMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGG 128
Query: 362 TG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 538
TG T+YPPLS+++ +VD+ IF L ++G++S + L
Sbjct: 129 TGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILS 188
Query: 539 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 718
+ ++ IT+ G + +LL+D + NT FFDP GDPILYQHLF FFGHPE
Sbjct: 189 VSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPE 248
Query: 719 VYILIXPGFGI 751
VYILI P FG+
Sbjct: 249 VYILILPAFGV 259
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 132 bits (320), Expect = 7e-30
Identities = 80/248 (32%), Positives = 111/248 (44%), Gaps = 3/248 (1%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDD--QIYNTIVTAHAXXX 187
S NHK IG Y R EL G +I D +IYN + T H
Sbjct: 14 SGNHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIM 73
Query: 188 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 367
N L P++LG D+ +PR+N +E G+GTG
Sbjct: 74 VFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTG 133
Query: 368 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 547
T+YPPLS+++++ G +D IF L AGI+S D++
Sbjct: 134 WTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAA 191
Query: 548 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 727
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI
Sbjct: 192 WSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYI 251
Query: 728 LIXPGFGI 751
+I PGFGI
Sbjct: 252 MILPGFGI 259
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 130 bits (314), Expect = 4e-29
Identities = 82/247 (33%), Positives = 110/247 (44%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
I S NH D+ LY R +L P L D +YN VT H
Sbjct: 4 IMSVNHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMV 61
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N L+P PD+ FPR+N + F ++ + A G
Sbjct: 62 FFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGW 116
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
T YPPLSS SV+ ++FSLHLAGI+S + L LF
Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCW 170
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++
Sbjct: 171 SIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVV 230
Query: 731 IXPGFGI 751
I P FG+
Sbjct: 231 ILPVFGL 237
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 129 bits (311), Expect = 8e-29
Identities = 85/245 (34%), Positives = 107/245 (43%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
S +HK IG LY R L +P + +YN +VT H
Sbjct: 107 SLDHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFF 166
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
N +P+ L D+ PR+N++ G G G T+
Sbjct: 167 FLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTL 224
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
YPPLS G VD +FSLHLAG+SS S + V A
Sbjct: 225 YPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAY 278
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LI
Sbjct: 279 LFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLIL 338
Query: 737 PGFGI 751
PGFGI
Sbjct: 339 PGFGI 343
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 124 bits (298), Expect = 3e-27
Identities = 87/253 (34%), Positives = 114/253 (45%), Gaps = 8/253 (3%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ +HKDIG LY R EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFL 150
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXX--XXXXXXXXXXXIVEN-GAGTG 367
N L+PL++GA D+AFPRIN I F I E A TG
Sbjct: 151 FATPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTG 209
Query: 368 *TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 532
T+Y PLS N A+ G VDL + LHL+G+S+ S+
Sbjct: 210 WTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWAN 267
Query: 533 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 712
L +F + + AI +LL DRN TSFF AG G IL+QHLF FFGH
Sbjct: 268 LDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGH 325
Query: 713 PEVYILIXPGFGI 751
PEVYI++ P GI
Sbjct: 326 PEVYIIVLPPMGI 338
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 120 bits (288), Expect = 5e-26
Identities = 73/247 (29%), Positives = 103/247 (41%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
+ + +HK IG +Y R +L P + +++N + T H
Sbjct: 27 VSTLDHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMV 86
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N VPL++GA D+AFPR+N+ F + + G
Sbjct: 87 FLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGW 145
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
Y PLSS + VD I L + GI S S ++PLFV
Sbjct: 146 FSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVW 205
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
+ + A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYIL
Sbjct: 206 MMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYIL 265
Query: 731 IXPGFGI 751
I PGFG+
Sbjct: 266 ILPGFGM 272
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 119 bits (286), Expect = 9e-26
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 6/251 (2%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI----GDDQIYNTIVTAHAXX 184
+T+HK IG LY R EL G I + IYN +T H
Sbjct: 15 TTSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLI 74
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAG 361
N L+P+++G +++ PR+N I F ++
Sbjct: 75 MLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPIS 134
Query: 362 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 538
+G T+YPPLS+ A G ++DL++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 539 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 718
++ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPE
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPE 252
Query: 719 VYILIXPGFGI 751
VY++I P FG+
Sbjct: 253 VYVIILPVFGL 263
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 116 bits (279), Expect = 6e-25
Identities = 76/246 (30%), Positives = 100/246 (40%)
Frame = +2
Query: 14 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXX 193
+ +HK IG Y R EL P ++YN ++T H
Sbjct: 23 FCVDHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIF 82
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
N L+PL++G D+AFPR+N + F V G T
Sbjct: 83 LWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWT 140
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
YPPLS G +L I SL L G SS +PLF A
Sbjct: 141 SYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWA 198
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+I
Sbjct: 199 MLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMI 258
Query: 734 XPGFGI 751
P FG+
Sbjct: 259 LPFFGV 264
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 115 bits (276), Expect = 1e-24
Identities = 74/247 (29%), Positives = 105/247 (42%), Gaps = 2/247 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ +HKDIG LY R EL + +YN ++T+H
Sbjct: 65 TVDHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFL 124
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG* 370
N +PL++ A D+AFPRIN I F ++ A T
Sbjct: 125 FGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSW 183
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
T+Y PLS ++ +VD+ + LHL G+S+ + L +F
Sbjct: 184 TMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSW 241
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
+ + A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L
Sbjct: 242 TMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVL 300
Query: 731 IXPGFGI 751
+ P GI
Sbjct: 301 VLPPMGI 307
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 114 bits (275), Expect = 2e-24
Identities = 68/206 (33%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Frame = +2
Query: 152 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 331
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 332 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 508
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 509 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 673
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 674 PILYQHLF*FFGHPEVYILIXPGFGI 751
PIL+QHLF FGHPEVYI+I P +GI
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGI 291
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 114 bits (274), Expect = 3e-24
Identities = 74/248 (29%), Positives = 105/248 (42%), Gaps = 1/248 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
+ + +HK IG ++ R EL PG I D YN T H
Sbjct: 37 LLTVDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMI 96
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N ++PL+LGA D+AFPR+N + ++ G TG
Sbjct: 97 FLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGW 155
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
T Y P S AH +V +F + G SS ++ ++PLFV
Sbjct: 156 TFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVW 212
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYI 727
A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI
Sbjct: 213 AIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYI 271
Query: 728 LIXPGFGI 751
++ P FG+
Sbjct: 272 MVLPSFGV 279
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 113 bits (271), Expect = 6e-24
Identities = 74/245 (30%), Positives = 99/245 (40%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+T+HK IG +Y R +LG P + +YN + T H
Sbjct: 28 TTDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFL 87
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
N +VPL++GA D+AFPR+N + V G
Sbjct: 88 GLMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFA 146
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
Y PL+ VD I + L G++S + +++PLFV
Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQ 206
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
+ AF A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILI
Sbjct: 207 LVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILIL 266
Query: 737 PGFGI 751
P GI
Sbjct: 267 PTMGI 271
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 113 bits (271), Expect = 6e-24
Identities = 76/248 (30%), Positives = 104/248 (41%), Gaps = 2/248 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
I +T+HKDIG LY R +L P S Y VT H
Sbjct: 16 ITTTDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIML 75
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG 367
N +VPL +GA D+AFPR+N + + E+GA G
Sbjct: 76 LWFASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVG 134
Query: 368 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 547
T+Y PL++ I G +DLA ++ L +S + ++P+F
Sbjct: 135 WTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFT 194
Query: 548 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVY 724
++ T +LL DRNL T FF +PAGG +L+ HLF FFGHPEVY
Sbjct: 195 WSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVY 252
Query: 725 ILIXPGFG 748
IL+ P G
Sbjct: 253 ILLFPALG 260
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 112 bits (270), Expect = 8e-24
Identities = 66/209 (31%), Positives = 95/209 (45%)
Frame = +2
Query: 122 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 301
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 302 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 481
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 482 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 661
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 662 GGGDPILYQHLF*FFGHPEVYILIXPGFG 748
GGDP++YQ++F F+ HP VY+ + P FG
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLPVFG 208
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 112 bits (269), Expect = 1e-23
Identities = 73/249 (29%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Frame = +2
Query: 14 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXX 193
++T+ K IG Y R EL P + + D +YN + T H
Sbjct: 32 FNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLF 91
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG* 370
N L+P ++GAPD+AFP++N F G A +G
Sbjct: 92 LFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGW 150
Query: 371 TVYPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 544
YPP+S + + H L I ++ L+GISS F ++P+F
Sbjct: 151 WSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVF 210
Query: 545 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
V G +LL D + TSFF P GGGDP+L+QH F F+ HP VY
Sbjct: 211 VWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVY 270
Query: 725 ILIXPGFGI 751
+L+ P FGI
Sbjct: 271 VLVLPVFGI 279
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 111 bits (267), Expect = 2e-23
Identities = 74/246 (30%), Positives = 102/246 (41%), Gaps = 1/246 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS-LIGDDQIYNTIVTAHAXXXXX 193
+ +HK IG Y R +L P + IG D+ YN I T H
Sbjct: 26 TVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMF 84
Query: 194 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 373
LVPL++G IAFPR+N + V+ G G
Sbjct: 85 LFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWF 143
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
Y PLS G+ D+ + +S+ S D++PLFV +
Sbjct: 144 AYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWS 203
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
+ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+
Sbjct: 204 MLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIF 263
Query: 734 XPGFGI 751
P G+
Sbjct: 264 LPAVGM 269
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 111 bits (267), Expect = 2e-23
Identities = 72/246 (29%), Positives = 101/246 (41%), Gaps = 1/246 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+T+HK +G +Y RAEL PG ++ +N + T H
Sbjct: 35 TTDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLL 94
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*T 373
N ++PL +GAPD+AFPR+N F + GA G T
Sbjct: 95 YGTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWT 153
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
+Y PLS I G D+ I + GI S + ++P+F
Sbjct: 154 MYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWN 213
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
+ + + A +L DR L +DPA GG +L+QHLF FFGHPEVY+L
Sbjct: 214 IFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLA 272
Query: 734 XPGFGI 751
P FGI
Sbjct: 273 LPFFGI 278
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 110 bits (265), Expect = 3e-23
Identities = 67/247 (27%), Positives = 101/247 (40%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
+ + +HK IG ++ R EL PG I D YN + T H
Sbjct: 30 LLTQDHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMI 89
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N L+P+++GA D+AFP++N + F +V+ GA TG
Sbjct: 90 FLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGW 148
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
T Y P S+ + V L F L G SS + +LPLFV
Sbjct: 149 TFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVW 205
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
++ T+ ++ ++ + FDPA GGDP+L+QH F F+ HP VYI+
Sbjct: 206 SIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIM 265
Query: 731 IXPGFGI 751
+ P +
Sbjct: 266 VLPAMAV 272
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 107 bits (256), Expect = 4e-22
Identities = 60/127 (47%), Positives = 69/127 (54%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
+ STNHKD GTL RAELG PG+L+GDDQ N IVTAHA
Sbjct: 8 LXSTNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMI 67
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N LVPL++GAPD+AFPR+NN+ F VE GAGTG
Sbjct: 68 FXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGW 127
Query: 371 TVYPPLS 391
TVYPPL+
Sbjct: 128 TVYPPLA 134
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 105 bits (253), Expect = 9e-22
Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 1/246 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ +HK IG +Y R +L P + + YN I+T H
Sbjct: 21 TVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFF 80
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*T 373
N +VPL+LGA D+A PR+N + GA G T
Sbjct: 81 FIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWT 140
Query: 374 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 553
Y P S A VD + ++ L G SS S ++P++V +
Sbjct: 141 FYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWS 197
Query: 554 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 733
V + A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++
Sbjct: 198 VFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVML 257
Query: 734 XPGFGI 751
P GI
Sbjct: 258 LPYLGI 263
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 105 bits (251), Expect = 2e-21
Identities = 68/247 (27%), Positives = 97/247 (39%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
I + +HK +G +Y RA+L P + D YN I T H
Sbjct: 48 ITTVDHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMI 107
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N +VPL +GA D+AFP +NN+ F ++ G
Sbjct: 108 IFMAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGW 166
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
T Y PL+SN G + + L +AGI + + ++P+F
Sbjct: 167 TSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTW 226
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
IT A+ +L DR FF GG P+L+ +LF +GHPEVYI+
Sbjct: 227 TTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIV 286
Query: 731 IXPGFGI 751
I P FGI
Sbjct: 287 ILPAFGI 293
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 104 bits (250), Expect = 2e-21
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 2/245 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDD-QIYNTIVTAHAXXX 187
I++T+HK +G LY R EL G I DD +YNT + H
Sbjct: 9 IFTTDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAM 68
Query: 188 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 367
N +PL++GA D+AFPR+N + + +
Sbjct: 69 ILAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIM 128
Query: 368 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 547
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 129 WTGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFV 185
Query: 548 *AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 724
A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY
Sbjct: 186 WAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVY 244
Query: 725 ILIXP 739
++ P
Sbjct: 245 VIFLP 249
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 102 bits (245), Expect = 8e-21
Identities = 74/248 (29%), Positives = 104/248 (41%), Gaps = 1/248 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS-LIGDDQIYNTIVTAHAXXX 187
++ST+H D+G LY RAEL PG+ I D +N + T H
Sbjct: 15 MFSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTL 74
Query: 188 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 367
N VP+++ D+A+P++N I F + T
Sbjct: 75 IFLFILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT- 132
Query: 368 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 547
PP S I+ G + D+ IF L + GISS S Q+PL
Sbjct: 133 ----PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLA 187
Query: 548 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 727
+ ++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+
Sbjct: 188 WSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYV 247
Query: 728 LIXPGFGI 751
L+ P G+
Sbjct: 248 LVIPAIGM 255
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 102 bits (244), Expect = 1e-20
Identities = 62/245 (25%), Positives = 99/245 (40%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ +HK I LY R +L P + Q YN ++T H
Sbjct: 21 TVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFL 80
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
N +VPL +GA D++FP +N + F + G T
Sbjct: 81 AAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTS 139
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
Y LS + +G +D + L ++G+ + ++ +LPLF
Sbjct: 140 YASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTT 197
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
+ + + +++ DR T+FF+P GG+ ++++HLF FGHPEVYILI
Sbjct: 198 FVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILIL 257
Query: 737 PGFGI 751
P FGI
Sbjct: 258 PAFGI 262
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 101 bits (241), Expect = 3e-20
Identities = 74/256 (28%), Positives = 105/256 (41%), Gaps = 11/256 (4%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGN--PGSLIGD---DQIYNTIVTAHAX 181
+TN IG LY R + N PGS + D + +Y ++ H
Sbjct: 11 TTNAHYIGILYILLSIINFVLAGIAAMYMRLTIANTPPGSPVQDPFNELLYTWFMSLHGL 70
Query: 182 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGA 358
N LVP ++GAPD+ +PRIN + F + ++G
Sbjct: 71 GMLLLFAMQAVAGAA-NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGD 129
Query: 359 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 538
G T+YPPLS+ + VDL + + +AG SS +
Sbjct: 130 SIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMS 187
Query: 539 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*F 703
LF +V + A +LL +R+L FF DPA GDP L+QH+F F
Sbjct: 188 LFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWF 247
Query: 704 FGHPEVYILIXPGFGI 751
FGHPEVYIL+ P G+
Sbjct: 248 FGHPEVYILVLPAMGL 263
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 94.7 bits (225), Expect = 2e-18
Identities = 62/244 (25%), Positives = 92/244 (37%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ NH D+G ++ RA+L P S + YN + T H
Sbjct: 26 TVNHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFL 85
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
L+P +LG+ D+AFPR+ F + +G +
Sbjct: 86 FAIPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFM 144
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
YPPLSS + G + D + + IS+ S ++P+F
Sbjct: 145 YPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYA 204
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
+TA +L +R + FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 205 LVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFL 264
Query: 737 PGFG 748
P G
Sbjct: 265 PAAG 268
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 94.3 bits (224), Expect = 3e-18
Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 15/217 (6%)
Frame = +2
Query: 146 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 325
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 326 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 493
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 494 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 658
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 659 ------AGGGDPILYQHLF*FFGHPEVYILIXPGFGI 751
AGGG P+L+QHLF F+ HP VYI+I P G+
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGM 302
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 93.9 bits (223), Expect = 4e-18
Identities = 85/227 (37%), Positives = 98/227 (43%), Gaps = 1/227 (0%)
Frame = +2
Query: 26 HKDIGTL-YXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 202
HKD GTL + R L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 203 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 382
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 383 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 562
P SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180
Query: 563 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 703
A AIT+L R N SFF P G P + F F
Sbjct: 181 XXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 93.9 bits (223), Expect = 4e-18
Identities = 75/262 (28%), Positives = 102/262 (38%), Gaps = 15/262 (5%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSL-IGDDQIYNTIVTAHAXXX 187
++S + K I Y R +LG PG+ D Y +T H
Sbjct: 33 VFSQDAKVIAIQYSLTASAIGLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIM 92
Query: 188 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGT 364
N L+PL++GA D+ FP +N + + V G G
Sbjct: 93 VIYLLTALFLGGFGNYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGA 152
Query: 365 G*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 538
G T+YPP + S + + L + SL L I + +LP
Sbjct: 153 GWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLP 212
Query: 539 LFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA----------GGGDPILY 685
L V + T G++ +LL DR L TSFF P GGG P+L+
Sbjct: 213 LTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLF 271
Query: 686 QHLF*FFGHPEVYILIXPGFGI 751
QHLF FFGHPEVYI+ P FGI
Sbjct: 272 QHLFWFFGHPEVYIVALPAFGI 293
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 93.5 bits (222), Expect = 5e-18
Identities = 64/245 (26%), Positives = 94/245 (38%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ +HK IG Y R +L P + + Y+++ T H
Sbjct: 46 TVDHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFL 105
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
N L PL+LG+ D+AFPR+ + + G
Sbjct: 106 YALPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFN 164
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVL 284
Query: 737 PGFGI 751
P GI
Sbjct: 285 PAMGI 289
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 92.7 bits (220), Expect = 9e-18
Identities = 69/248 (27%), Positives = 97/248 (39%), Gaps = 3/248 (1%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNP-GSLIG--DDQIYNTIVTAHAXXX 187
S +HK IG +Y R +L G G + Y+ I TAH
Sbjct: 52 SVDHKKIGVMYIIVAMIMLLRGFADALMMRTQLAMATGGAHGVFPPEHYDQIFTAHGVIM 111
Query: 188 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 367
N +VPL +GA D+AFP +N++ F V N A TG
Sbjct: 112 IIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTG 170
Query: 368 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 547
YPPL+ VD I++L ++GI + +P+F
Sbjct: 171 WVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFT 230
Query: 548 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 727
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYI
Sbjct: 231 WTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYI 290
Query: 728 LIXPGFGI 751
L+ P FGI
Sbjct: 291 LVLPAFGI 298
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 92.7 bits (220), Expect = 9e-18
Identities = 55/132 (41%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 365 G*TVYPPLSSNI 400
G TV LS I
Sbjct: 125 GWTVKCKLSQII 136
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 91.1 bits (216), Expect = 3e-17
Identities = 65/251 (25%), Positives = 96/251 (38%), Gaps = 4/251 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
+ + +HK IG +Y R +L PG + + +N + T HA
Sbjct: 24 VATVDHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMI 83
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG--- 361
N +PL++GA D+AFPR+N + ++ G
Sbjct: 84 FLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVP 142
Query: 362 -TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 538
G Y L+S G D L L GI + + ++P
Sbjct: 143 DIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMP 202
Query: 539 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 718
+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FGHPE
Sbjct: 203 VFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPE 262
Query: 719 VYILIXPGFGI 751
VYILI P GI
Sbjct: 263 VYILILPAMGI 273
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 91.1 bits (216), Expect = 3e-17
Identities = 60/245 (24%), Positives = 94/245 (38%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ +H+ +G + R +L P + + YN + T H
Sbjct: 52 AVSHRAVGKRFLITGFIFFLIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFL 111
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
L+PL++GA D+ FPR+ + + + G +
Sbjct: 112 FAIPMLEGFAVY-LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFM 170
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
Y PLS++ G S D + + LA I+S S ++P+ + +
Sbjct: 171 YVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYL 230
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
TAF +L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 231 LATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFL 290
Query: 737 PGFGI 751
P G+
Sbjct: 291 PAAGM 295
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 90.2 bits (214), Expect = 5e-17
Identities = 55/141 (39%), Positives = 65/141 (46%)
Frame = +2
Query: 41 TLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXX 220
TLY R ELG PGSL+ DDQ+YN +VTAH
Sbjct: 1 TLYFIFGIWSGLLGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIG 60
Query: 221 XXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 400
N LVPL+LGAPD+AFPR+NN+ F + G + PL
Sbjct: 61 GFGNWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVT 118
Query: 401 AHRGRSVDLAIFSLHLAGISS 463
G SVDLAIF LHLAG+SS
Sbjct: 119 ISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 89.8 bits (213), Expect = 6e-17
Identities = 68/250 (27%), Positives = 97/250 (38%), Gaps = 5/250 (2%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAEL-----GNPGSLIGDDQIYNTIVTAHAX 181
+ +HK IG +Y R +L G+ G L + Y+ I TAH
Sbjct: 51 TVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLAAATGGSEGYL--PPEHYDQIFTAHGV 108
Query: 182 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 361
N VPL +GA D+AFP +N++ F V A
Sbjct: 109 IMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAK 167
Query: 362 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 541
TG YPPL+ G VD I++L L+G+ + +P+
Sbjct: 168 TGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPI 227
Query: 542 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 721
F A+ +L DR L+ F GG+P++Y +LF +GHPEV
Sbjct: 228 FTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEV 287
Query: 722 YILIXPGFGI 751
YILI P FG+
Sbjct: 288 YILILPAFGV 297
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 89.0 bits (211), Expect = 1e-16
Identities = 59/244 (24%), Positives = 93/244 (38%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ NH D+G ++ RA+L +P S + Y + T H
Sbjct: 26 TVNHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFL 85
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
L+P +LG+ D+A+PR++ F + +G +
Sbjct: 86 FAIPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFM 144
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
YPPL+S + G + D + + IS+ S D++P++
Sbjct: 145 YPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYA 204
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
+TA +L +R FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 205 LVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFL 264
Query: 737 PGFG 748
P G
Sbjct: 265 PAAG 268
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 88.2 bits (209), Expect = 2e-16
Identities = 59/216 (27%), Positives = 86/216 (39%)
Frame = +2
Query: 104 RAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 283
R +L P + D + YN + + H ++PL+LG D+ FPR+
Sbjct: 62 RLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTFPRL 120
Query: 284 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 463
N + ++ G YPPL+ G +D + IS+
Sbjct: 121 NAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVTFMEISA 180
Query: 464 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 643
S +++P+FV AV + +F A +L DR
Sbjct: 181 LVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGM 240
Query: 644 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 751
FF A GDPIL+QHLF FFGHPEVYI+ P G+
Sbjct: 241 HFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGM 275
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 88.2 bits (209), Expect = 2e-16
Identities = 65/248 (26%), Positives = 93/248 (37%), Gaps = 1/248 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNP-GSLIGDDQIYNTIVTAHAXXX 187
I + N++ IG LY R +L P L+G D YN I T H
Sbjct: 34 ISAVNNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTM 92
Query: 188 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 367
L+P +L A D+ FPR++ + G
Sbjct: 93 MFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGG 151
Query: 368 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 547
+YPPL+ G + D + + IS+ S ++P+F
Sbjct: 152 WFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFA 211
Query: 548 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 727
A+ I A A +L +R+ FF GGDP+L+QHLF FFGHPEVYI
Sbjct: 212 WAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYI 271
Query: 728 LIXPGFGI 751
+ P G+
Sbjct: 272 IFLPAAGL 279
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 87.8 bits (208), Expect = 3e-16
Identities = 65/218 (29%), Positives = 93/218 (42%), Gaps = 14/218 (6%)
Frame = +2
Query: 140 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 319
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 320 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 487
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 488 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP--- 658
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIY 277
Query: 659 -AG------GGDPILYQHLF*FFGHPEVYILIXPGFGI 751
AG GG P+L+QHLF F GHPEVYI++ P GI
Sbjct: 278 IAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGI 315
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 87.0 bits (206), Expect = 4e-16
Identities = 66/247 (26%), Positives = 94/247 (38%), Gaps = 2/247 (0%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAE--LGNPGSLIGDDQIYNTIVTAHAXXXX 190
ST+HK IG +Y RA+ +G G + D + + + H
Sbjct: 73 STDHKKIGIMYVVLALVMLTRAIAEAVLMRAQGAVGLGGGFLSSDH-FAQLFSTHGTIMI 131
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N +VPL +GA D+AFP +N+I +V + G
Sbjct: 132 FFMAMPFLTGLI-NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGW 190
Query: 371 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 191 FGYPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTW 250
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 730
TA L DR L+ FF GG+ + + ++F FGHPEVYIL
Sbjct: 251 TALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYIL 310
Query: 731 IXPGFGI 751
I P FG+
Sbjct: 311 ILPAFGV 317
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 86.6 bits (205), Expect = 6e-16
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYNTIVTAHAXX 184
++STNHKDIGTLY R EL PG+ I G+ Q+YN ++TAHA
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFL 68
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N VP+++G+PD+AFPR+NNI F +VE G G+
Sbjct: 69 MIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGS 128
Query: 365 G*TV 376
G TV
Sbjct: 129 GWTV 132
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 86.2 bits (204), Expect = 8e-16
Identities = 69/248 (27%), Positives = 97/248 (39%), Gaps = 1/248 (0%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXX 190
+Y+TN D+G +Y R +L +L D Y VT H
Sbjct: 11 LYTTNASDVGQMYIVLGIVALIIGSVNAALIRDQLSF-NNLNAVD--YYDAVTLHGIFMI 67
Query: 191 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 370
N LVP ++GA D+ +P+IN + F ++ G
Sbjct: 68 FFVVMPLSTGFA-NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGW 125
Query: 371 TVYPPLS-SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 547
+Y PLS + G +L +L L+G+SS + ++PLFV
Sbjct: 126 YMYAPLSVETTVNYGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFV 183
Query: 548 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 727
TA + +R T FFD A GG P+L+Q LF FFGHPEVYI
Sbjct: 184 WGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYI 243
Query: 728 LIXPGFGI 751
LI P G+
Sbjct: 244 LILPAMGL 251
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 84.2 bits (199), Expect = 3e-15
Identities = 59/245 (24%), Positives = 87/245 (35%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+T+HK IG LY R +L P + YN ++T HA
Sbjct: 29 TTDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFF 88
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
N +PL LG D+A PR+N G T
Sbjct: 89 FLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTF 148
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
Y PL+ + G SV + L+ G+ S ++P+F ++
Sbjct: 149 YYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSI 206
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
T+ A + + L S F+P GG P+LYQ F F+ HP VY+++
Sbjct: 207 FATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLL 266
Query: 737 PGFGI 751
P GI
Sbjct: 267 PYLGI 271
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 83.8 bits (198), Expect = 4e-15
Identities = 65/258 (25%), Positives = 96/258 (37%), Gaps = 13/258 (5%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+TNHKDIG LY R EL + G+ + YN V+ H
Sbjct: 19 TTNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFW 78
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
N LVPL +GA D+AFPR+N + + G T+
Sbjct: 79 FISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTM 137
Query: 377 YPPLSSN--IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 550
Y PL++ I G + +L + + +P+F
Sbjct: 138 YAPLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSL 197
Query: 551 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF 697
++ +T + A+ IL +D L T++F D G +L+ HLF
Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLF 257
Query: 698 *FFGHPEVYILIXPGFGI 751
FFGHPEVYI+ P G+
Sbjct: 258 WFFGHPEVYIVFFPALGV 275
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 245 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 424
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 425 LAIFS 439
LAI+S
Sbjct: 61 LAIYS 65
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +1
Query: 544 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 711
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 80.2 bits (189), Expect = 5e-14
Identities = 69/257 (26%), Positives = 99/257 (38%), Gaps = 11/257 (4%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG------SLIG----DDQIYNT 160
I++TNHK IG LY R +L P S+ D YN
Sbjct: 27 IFTTNHKQIGLLYILTSLFFFIGGGVMALLMRVQLAIPRYDLVKYSIFSGRFLDALQYNQ 86
Query: 161 IVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXX 340
+VT H L+PL +G+ D+ +PR+N + +
Sbjct: 87 LVTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGF 145
Query: 341 IVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 517
+ G TG TVY PLSS D A ++ L GI +
Sbjct: 146 FLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKG 205
Query: 518 XSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 697
LPLFV AV A G +LL ++ S++ GG +++++LF
Sbjct: 206 YRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLF 264
Query: 698 *FFGHPEVYILIXPGFG 748
+FGHPEVY+L+ PG G
Sbjct: 265 WYFGHPEVYLLLLPGTG 281
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 79.4 bits (187), Expect = 9e-14
Identities = 48/131 (36%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Frame = +2
Query: 365 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 535
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 536 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 715
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 716 EVYILIXPGFG 748
EVY+LI P FG
Sbjct: 403 EVYVLIIPTFG 413
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +2
Query: 2 RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYNTIVTAH 175
+K +Y+ NHK I Y R EL +P S GD Y +VTAH
Sbjct: 52 KKYVYTINHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAH 111
Query: 176 AXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 298
N L+P +G+ D+A+PR+N+I F
Sbjct: 112 GLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 79.0 bits (186), Expect = 1e-13
Identities = 65/250 (26%), Positives = 95/250 (38%), Gaps = 4/250 (1%)
Frame = +2
Query: 14 YST--NHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIG--DDQIYNTIVTAHAX 181
YST NHK IG +Y R + +G + Y I TAH
Sbjct: 44 YSTTFNHKKIGKIYLIISFLMMFRGLTDALLIRLQQILCYKHLGFLSNHHYCQIFTAHGD 103
Query: 182 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 361
N ++PL +G+ D+AFP +N + F I+ A
Sbjct: 104 IMIFFVAMPMIIGIM-NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAK 162
Query: 362 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 541
TG YPPLS VD +S+ ++GI + F+++ +
Sbjct: 163 TGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISI 222
Query: 542 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 721
F+ + + + DR L+T F+ GG +LY +L +GHPEV
Sbjct: 223 FMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEV 282
Query: 722 YILIXPGFGI 751
YILI P FGI
Sbjct: 283 YILILPSFGI 292
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 78.2 bits (184), Expect = 2e-13
Identities = 48/132 (36%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
++STN KDI LY R EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N L+PL+LGA D+AF R+NNI F +VE GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 365 G*TVYPPLSSNI 400
G TV SS +
Sbjct: 131 GWTVKKICSSKM 142
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 77.8 bits (183), Expect = 3e-13
Identities = 58/243 (23%), Positives = 88/243 (36%)
Frame = +2
Query: 23 NHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 202
N+ IG Y R +L + +YN + T H
Sbjct: 97 NNNYIGVFYVGAAFLFFVLAGIVALMMRTQLAVAENDFIGPALYNQLFTMHGTVMMFLFA 156
Query: 203 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 382
L+P +LGA D+ FPR++ F V G + P
Sbjct: 157 VPAVEAMGIL-LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNP 215
Query: 383 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 562
PL++ G + D + + IS+ + ++P+F A+ +
Sbjct: 216 PLTTETYSPGYNADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLV 275
Query: 563 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 742
A A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ P
Sbjct: 276 FALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPA 335
Query: 743 FGI 751
G+
Sbjct: 336 AGM 338
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 77.8 bits (183), Expect = 3e-13
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 16/228 (7%)
Frame = +2
Query: 116 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 295
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 296 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 460
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 461 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 640
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 641 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILIXPGFGI 751
TSFF P+G GG +L+QHLF FFGHPEVYI I P GI
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 77.8 bits (183), Expect = 3e-13
Identities = 54/241 (22%), Positives = 87/241 (36%)
Frame = +2
Query: 17 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 196
+ N+ ++G Y R +L PG+ +N T H
Sbjct: 54 AVNNSEVGVWYALTALAFMLCAGVLAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFL 113
Query: 197 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 376
L+P +LGA D+ FPR++ + + + +G +
Sbjct: 114 FAVPMFEAISII-LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFM 172
Query: 377 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 556
YPPL++ G D+ + L ++S + +PL+ V
Sbjct: 173 YPPLATQ--DEGLGSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYV 230
Query: 557 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 736
+ + +R + FFDP GGDP+L+QHLF FGHPEVYI+
Sbjct: 231 LVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFL 290
Query: 737 P 739
P
Sbjct: 291 P 291
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +2
Query: 632 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 751
N T+FFDPAGGGD IL+QHLF FFGHPEVYILI PGFG+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGM 230
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 74.1 bits (174), Expect = 3e-12
Identities = 54/216 (25%), Positives = 82/216 (37%), Gaps = 14/216 (6%)
Frame = +2
Query: 146 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 325
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 326 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 496
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 497 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 664
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 665 -------GGDPILYQHLF*FFGHPEVYILIXPGFGI 751
GG P+L+QHLF F+ HP VYI++ P G+
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGM 305
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +2
Query: 383 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 562
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 563 TAFXXXXXXXXXAGAITILLTDR 631
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 217 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 342
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAXX 184
+YSTN KDI LY R EL PG+ L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVL 65
Query: 185 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 364
N L+PL++GA D++F R+NNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGT 125
Query: 365 G*TV 376
G TV
Sbjct: 126 GWTV 129
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 68.9 bits (161), Expect = 1e-10
Identities = 45/173 (26%), Positives = 71/173 (41%)
Frame = +2
Query: 230 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 409
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 410 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 589
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 590 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFG 748
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++ P FG
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFG 315
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/41 (68%), Positives = 29/41 (70%)
Frame = +1
Query: 631 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNXTRIWYN 753
K KYIIF S W F+STFILIFWT SLYFN T IWYN
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYN 47
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 341 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 463
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = +2
Query: 527 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 706
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 707 GHPEVYILI 733
GH +V LI
Sbjct: 72 GHTDVLFLI 80
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 547 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 699
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.2 bits (107), Expect = 4e-04
Identities = 37/140 (26%), Positives = 44/140 (31%)
Frame = +1
Query: 223 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 402
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 403 T*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXX 582
T R +F T CM +YS
Sbjct: 122 TLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTS 181
Query: 583 XTTCFSWSYYNIINRSKLKY 642
+ S+YNI K KY
Sbjct: 182 FSPSIGSSHYNITYWPKPKY 201
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 46.8 bits (106), Expect = 6e-04
Identities = 39/172 (22%), Positives = 62/172 (36%)
Frame = +2
Query: 236 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 415
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 416 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 595
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 596 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 751
+ L+D + F+ G P+ Y F F HPEVY+ I P F I
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAI 346
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 178
++STN KDI LY R EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 41.5 bits (93), Expect = 0.022
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 178
+YSTN KDI LY R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYN 157
++STNHKDIGTLY R EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.050
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +2
Query: 410 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 589
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 590 XXXAGAITILLTDRNLNT 643
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
Score = 33.1 bits (72), Expect = 7.6
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 104 RAELGNPGSLIGDDQIYNTIVTAHA 178
R EL GS++ +QIYNT+VT+HA
Sbjct: 22 RLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 701 FFGHPEVYILIXPGFGI 751
FFGHPEVYILI PGFG+
Sbjct: 2 FFGHPEVYILILPGFGM 18
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 38.3 bits (85), Expect = 0.20
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYN 157
++STNHKDIGT Y R EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 36.7 bits (81), Expect = 0.61
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 688 TFILIFWTS*SLYFNXTRIWYN 753
+ ++IFW+S SLYFN IWYN
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYN 23
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 36.7 bits (81), Expect = 0.61
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIV 166
+YSTN KDI LY R EL PGS L G+ Q++N +V
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 701 FFGHPEVYILIXPGFGI 751
FFGHPEVY+LI P FGI
Sbjct: 1 FFGHPEVYVLILPVFGI 17
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 7 MNLFYKS*RYWNIIFYFWYLIRNNWNIFKXFNS 105
M + KS YWNI+F+FWYLI ++ K NS
Sbjct: 339 MIILNKSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +1
Query: 559 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNXT 738
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 739 RI 744
I
Sbjct: 154 SI 155
>UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=1;
Saccharomyces cerevisiae|Rep: Putative COX1/OXI3 intron
1 protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 834
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 11 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTA 172
+YSTN KDI LY R EL PGS L G+ Q++N T+
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNGAPTS 61
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 10.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 630 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 508
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 10.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 684 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 547
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,109,026
Number of Sequences: 1657284
Number of extensions: 9832433
Number of successful extensions: 22090
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 20283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21792
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -