Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D23
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0071 - 11910629-11910883,11912716-11913081                       29   3.6  
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022...    29   6.4  

>08_02_0071 - 11910629-11910883,11912716-11913081
          Length = 206

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -1

Query: 669 PSRTYNSSASHLLVQCAAVNTCRSVMR---TPPQYCSNPYGVIDAIHGHSR 526
           PS   +SS S   +         +V+R   +P   CS  +G + A+HGH R
Sbjct: 69  PSPMPSSSGSEGTINDHGAGNAAAVLRLEASPCHLCSREFGNMKAVHGHKR 119


>12_02_1229 +
           27197464-27197481,27200438-27201583,27201935-27202201,
           27202849-27202882,27202997-27203100,27203174-27203308,
           27203367-27203511,27203864-27203880
          Length = 621

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 569 EQYCGGVLITDRHVLTAAHCTRRW 640
           E +C G+L+ DRH++  A  TR+W
Sbjct: 56  EVHCNGLLLLDRHIVNPA--TRQW 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,645,416
Number of Sequences: 37544
Number of extensions: 509308
Number of successful extensions: 1303
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)