Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D21
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              26   0.38 
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   3.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.3  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 590 VGLRYFVPLYLNEQKIEKSKQDDSKLNRIETD 685
           +GLR  VP+   E  I++ K+DD +   I+ +
Sbjct: 24  IGLRAVVPICRIETSIDQQKEDDFRDGNIDVE 55


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +2

Query: 590 VGLRYFVPLYLNEQKIEKSKQDDSKLNRIETD 685
           +GLR  +P+   +  I++ K+DD +   I+ +
Sbjct: 24  IGLRAVIPVCRIDSGIDEKKEDDFRNGIIDVE 55


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 451 RSSWNVVYDMRVSRLRFEGLGSPLSVGVW 365
           RSS +V   M  + + F GL S L++G W
Sbjct: 305 RSSQSVAEVMDRNGVLFFGLLSDLAIGCW 333


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,317
Number of Sequences: 438
Number of extensions: 4839
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)