Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D18
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.1  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   9.4  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 237 VWDLSTGGPAASLPPAHTAPIHALAFSRDGTV 332
           VW  +T G  A+L  + T P+   A + D  V
Sbjct: 119 VWQSATSGGGANLTNSLTGPVRPAACTPDSRV 150


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -1

Query: 466 VANDCNRYLSSFGIGLFRVSSMGDSSVM 383
           +A++C R+L+  G G  ++S   ++ V+
Sbjct: 40  IADECERFLAPKGFGGVQISPPNENLVV 67



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 274 NEAAGPPVDKSQTIISPPL 218
           N   GPP D +  +ISP +
Sbjct: 348 NNDQGPPQDDAGNLISPSI 366


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -1

Query: 466 VANDCNRYLSSFGIGLFRVSSMGDSSVM 383
           +A++C R+L+  G G  ++S   ++ V+
Sbjct: 41  IADECERFLAPKGFGGVQISPPNENLVV 68



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 274 NEAAGPPVDKSQTIISPPL 218
           N   GPP D +  +ISP +
Sbjct: 349 NNDQGPPQDGAGNLISPSI 367


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 414 EFLQWEIRLLWL*SPTILLYNP 349
           EFL + +   WL S  I ++NP
Sbjct: 215 EFLLYRLLRCWLISKCIYVFNP 236


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 497 YKTQFTTCCWHI*EQCLIIFGY 562
           YKTQ T    H+  +C+ + GY
Sbjct: 769 YKTQKTGSKIHLFVKCVFLMGY 790


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 414 EFLQWEIRLLWL*SPTILLYNP 349
           EFL + +   WL S  I ++NP
Sbjct: 215 EFLLYRLLRCWLISKCIYVFNP 236


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 207 ASGGSGGDMMVWDLSTGGPAASLPPAHTAPIHALAFS 317
           A GG GG     +   GGP++ +    T  +   AFS
Sbjct: 522 AKGGGGGSGSGNNQPPGGPSSHVSAVLTCKVCDQAFS 558


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 274 NEAAGPPVDKSQTIISPPL 218
           N   GPP D +  +ISP +
Sbjct: 349 NNDQGPPQDDAGNLISPSI 367


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 507 NLLLAVGTYESSA*LYLGTCEIQV 578
           N  L   +Y  S  +YLGTC + V
Sbjct: 118 NAALPKISYVKSIDVYLGTCFVMV 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,991
Number of Sequences: 336
Number of extensions: 4270
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)