Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_D16
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical... 158 5e-39
Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical pr... 31 0.68
U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like pr... 31 0.68
Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical... 29 3.6
AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical ... 29 3.6
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 29 4.8
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.8
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 29 4.8
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 29 4.8
Z81063-1|CAB02952.1| 376|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z78412-9|CAD21655.1| 454|Caenorhabditis elegans Hypothetical pr... 28 8.4
>AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical
protein Y54G2A.23 protein.
Length = 168
Score = 158 bits (383), Expect = 5e-39
Identities = 74/161 (45%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Frame = +3
Query: 123 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKEN 302
L+ L + V VV S CEVC K ++ A + K P I ++ C+ ++NKEN
Sbjct: 4 LVLLISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKEN 63
Query: 303 RFCYYLGGLEESATGILGELSKPLSWSMPADKIC-EKLKKKDAQICDLRFDKQIDLNNXX 479
+FC+Y+G L ESAT I+ E++KPLSWSMP +K+C EKLK KDAQIC+L++DK +D
Sbjct: 64 KFCFYIGALPESATSIMNEVTKPLSWSMPTEKVCLEKLKGKDAQICELKYDKPLDWKTID 123
Query: 480 XXXXXXXXXXXXXNDWDEVCDGCIEKTDFIKRIEELKPKYM 602
+W EVC GC EK + IKRIEELKPKY+
Sbjct: 124 LKKMRVKELKNILGEWGEVCKGCTEKAELIKRIEELKPKYV 164
>Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical
protein F44F4.4 protein.
Length = 890
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +3
Query: 132 LATAVQVVLSLREGDC--EVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENR 305
+ TA+ + S+ G E +K V K + +S + K + +E F +FC+G
Sbjct: 84 ITTAILIRSSITNGSLLEEQRLKEVVKVSDFISTNFKLNVSGVEKNFNQFCRGFCQANEP 143
Query: 306 FCYYLGGLEESATGILGELSKPLSWSMP 389
Y GL+ +SK + S P
Sbjct: 144 VRQYYNGLQILGKNQTDGISKRIDLSYP 171
>U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like
protein family protein4 protein.
Length = 103
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 123 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKK 272
L+F+ATAV + C++C V+K+ ++ DV K + E KK
Sbjct: 10 LVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59
>Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 144 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 293
V+ + ++EGD T+ +F A D + DP + ++F G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299
>AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 144 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 293
V+ + ++EGD T+ +F A D + DP + ++F G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299
>AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical
protein C36C5.12 protein.
Length = 219
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 183 VCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 293
+C++ + FAA + D++ D K EFKK C KN
Sbjct: 59 LCIERLRDFAAKV-DELDMDKKSELKEFKKTCDSLKN 94
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 724 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIFLV*RSDLPMYLGFNSSILLMKSVFS 551
+++Q+HCP I V M +I+QC T + L RSD Y G S + + ++V +
Sbjct: 143 LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 199
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 724 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIFLV*RSDLPMYLGFNSSILLMKSVFS 551
+++Q+HCP I V M +I+QC T + L RSD Y G S + + ++V +
Sbjct: 143 LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 199
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 724 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIFLV*RSDLPMYLGFNSSILLMKSVFS 551
+++Q+HCP I V M +I+QC T + L RSD Y G S + + ++V +
Sbjct: 41 LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 97
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 724 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIFLV*RSDLPMYLGFNSSILLMKSVFS 551
+++Q+HCP I V M +I+QC T + L RSD Y G S + + ++V +
Sbjct: 143 LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 199
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 28.7 bits (61), Expect = 4.8
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +3
Query: 132 LATAVQVVL-SLREGDCEVCVKTVE--KFAATLSDDVKKDPKKIEAEFKKFCK-GSKNKE 299
LAT VQ +L S G+ + K+ E + +KK KK EAE KK K G + KE
Sbjct: 23 LATLVQAMLISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCREKE 82
Query: 300 NRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQI 434
+ LEE A I L K L KI E ++ +D ++
Sbjct: 83 AEEAQH-AALEE-AKKITFSLDKSLP-EAKVIKIGESVQHRDQRV 124
>Z81063-1|CAB02952.1| 376|Caenorhabditis elegans Hypothetical
protein F15D3.2 protein.
Length = 376
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 132 LATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEF 266
L+ A Q+ +E E K V FA+T DD DPK + A F
Sbjct: 120 LSGAEQLFKQDKEHSREHYRKVVIVFASTYKDDGANDPKPVAARF 164
>Z78412-9|CAD21655.1| 454|Caenorhabditis elegans Hypothetical
protein M176.10 protein.
Length = 454
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = -2
Query: 397 LSAGIDQLKGFDNSPKMPVADSSRPPK**QNLFSLFFEPLQNFLNSASIFLGSFFTSSDS 218
+ A I+ + G N+ + + PPK + FS F +N + + +G FF S
Sbjct: 385 IHADIEVIVGNTNATTITSTVAPIPPK--KGFFSTLFGSFKNLFGTVTNSIGGFFIDMGS 442
Query: 217 VAANF 203
NF
Sbjct: 443 RITNF 447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,835,918
Number of Sequences: 27780
Number of extensions: 310747
Number of successful extensions: 829
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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