Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D09
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.50 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.50 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.50 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   6.2  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   6.2  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 591 CNLFILKNLTWLCLQ---ERIQPLVLTIFLILCFKICTFLTDMKKCL 460
           CN  I +NL ++      ER+Q + L IF  L  ++ T++  ++KCL
Sbjct: 99  CNKKIDRNLQFVVSLPEVERVQWIWLLIFAYLIPEVGTWIRAVRKCL 145


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 591 CNLFILKNLTWLCLQ---ERIQPLVLTIFLILCFKICTFLTDMKKCL 460
           CN  I +NL ++      ER+Q + L IF  L  ++ T++  ++KCL
Sbjct: 99  CNKKIDRNLQFVVSLPEVERVQWIWLLIFAYLIPEVGTWIRAVRKCL 145


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 550 SRKNTTPGLDDIPYIMLQNLHVSD*YEKVFVIRFYCNL 437
           SRK     ++    I+     VSD Y+ + V++F+C+L
Sbjct: 224 SRKIFIECIEQYNVILRYTKIVSDTYQGILVVQFFCSL 261


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -2

Query: 339 WIFNMYFGRSLYIKYNNVFHGPKLAFKGLMQ--GSSLSPILYNLYTSQ 202
           WI     G +  I + N ++   L F  +M    S+++PILYN+ +S+
Sbjct: 314 WIIVAPAGSNFEIGFENYYN--ILYFSRIMFHINSAVNPILYNIISSK 359


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 176 GGNEADLSHLFLSCPTFKFQRLILVTDIMKLMDFDENNQTKHGNSLAN 33
           GG+EA    L  + P  ++ RL    D   ++  D+N+       LA+
Sbjct: 24  GGDEATADELCENRPADEYFRLTTEGDCRDVVRCDKNSDNNGATRLAS 71


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 300 KYNNVFHGPKLAFKGLMQGSSLSPILYNLYTSQ 202
           KY N+ +  ++    +   S+++PILYNL +S+
Sbjct: 328 KYYNILYFCRIM---VYLNSAINPILYNLMSSK 357


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -2

Query: 411 YDNVDLHQLIR 379
           YDN+DL+Q+++
Sbjct: 26  YDNIDLNQILK 36


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -2

Query: 411 YDNVDLHQLIR 379
           YDN+DL+Q+++
Sbjct: 26  YDNIDLNQILK 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,661
Number of Sequences: 336
Number of extensions: 4313
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)