Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D09
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    48   7e-06
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    36   0.024
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans...    30   1.6  
AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical ...    30   1.6  
U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p...    29   3.6  
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ...    29   3.6  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 27/95 (28%), Positives = 43/95 (45%)
 Frame = -2

Query: 483 LTDMKKCLLSGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLY 304
           + D  K +  G     ++LD   A+D +    L+  L SL     LL W+      RS  
Sbjct: 1   MNDWTKSIDHGEQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFR 60

Query: 303 IKYNNVFHGPKLAFKGLMQGSSLSPILYNLYTSQI 199
           ++        K A  G+ QG+ LSP+L+ +Y + I
Sbjct: 61  VRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDI 95


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -2

Query: 444 AICVFLDVQGAYDNVDLHQLIR-VLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL 268
           AI   LD++ A+D V   +L   ++ + G   K+  W+ N    R +   ++N +     
Sbjct: 469 AIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHT 528

Query: 267 AFKGLMQGSSLSPILYNLY 211
              G+ QGS +SP L+  Y
Sbjct: 529 LLGGVPQGSVISPNLFTFY 547


>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
           transcriptase protein.
          Length = 1066

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
 Frame = -2

Query: 435 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLA--F 262
           VF+D + A+D+V+   + + L   G  G  +  +   Y  ++    +   FH P      
Sbjct: 689 VFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECY--KNCTTNFTP-FHRPVAVPVT 745

Query: 261 KGLMQGSSLSPILYNLYTSQIYRHVT 184
           KG+ QG  +SP L++     ++R ++
Sbjct: 746 KGVRQGDPISPNLFSACLEHVFRKLS 771


>AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical
           protein K10F12.5 protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
 Frame = -2

Query: 435 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLA--F 262
           VF+D + A+D+V+   + + L   G  G  +  +   Y  ++    +   FH P      
Sbjct: 428 VFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECY--KNCTTNFTP-FHRPVAVPVT 484

Query: 261 KGLMQGSSLSPILYNLYTSQIYRHVT 184
           KG+ QG  +SP L++     ++R ++
Sbjct: 485 KGVRQGDPISPNLFSACLEHVFRKLS 510


>U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical
           protein F20B4.7 protein.
          Length = 891

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = -2

Query: 435 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLA--F 262
           VF+D + A+D V+   + + L   G  G  +  +   Y  ++    +   FH P      
Sbjct: 518 VFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECY--KNCTTNFTP-FHRPVAVPVT 574

Query: 261 KGLMQGSSLSPILYNLYTSQIYRHVT 184
           KG+ QG  +SP L++     ++R ++
Sbjct: 575 KGVRQGDPISPNLFSACLEHVFRKLS 600


>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -3

Query: 140 SCPTFKFQRLILVTDIMKLMDFDENNQTKHGNSLANN 30
           SC  F+++ +  V  I  L+D + N Q KHG SL+ N
Sbjct: 653 SCFQFRYRGMKGVLAIDPLLDKERNWQEKHGISLSKN 689


>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -3

Query: 140 SCPTFKFQRLILVTDIMKLMDFDENNQTKHGNSLANN 30
           SC  F+++ +  V  I  L+D + N Q KHG SL+ N
Sbjct: 653 SCFQFRYRGMKGVLAIDPLLDKERNWQEKHGISLSKN 689


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,041,820
Number of Sequences: 27780
Number of extensions: 374787
Number of successful extensions: 782
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)