Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D07
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   6.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.0  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = +2

Query: 242 AFGRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFAVRG 364
           AF  + K  D CQ     LH D         S+ H   ++G
Sbjct: 299 AFDPIEKIADVCQKYKLWLHVDAAWGGGALVSAKHRHLLKG 339


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -2

Query: 503 FLHPSQVIVMVDFVG*SPREFAGYPWCQFRMEQTFDCRLQW 381
           FLH     ++ D     P  + G  W  F  E++   ++ W
Sbjct: 805 FLHEDNTTLVWDNEQQVPFAYRGNQWVGFDDERSLKTKMAW 845


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 627 P*TLPVDMCYRKSRKTRIGNYARNSF 550
           P  +P D+   K RK  I  Y R  F
Sbjct: 333 PRRVPFDLFENKKRKNNIKLYVRRVF 358


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 697 RQTAKDAELPVPAPMVSSDPIEISIDFTGRYVLPK-IPEN 581
           ++  K+A+ P P   +     + ++D+  RY L K  P N
Sbjct: 244 KRNPKEADYPAPLYELIDRKYDENVDYQVRYWLQKGAPNN 283


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 653 HWRGYWQFG 679
           HW G WQ G
Sbjct: 200 HWHGVWQRG 208


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 653 HWRGYWQFG 679
           HW G WQ G
Sbjct: 200 HWHGVWQRG 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,481
Number of Sequences: 336
Number of extensions: 4325
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)