Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_D07
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0069 + 8782535-8782920,8783016-8783281,8783588-8783869,878... 47 1e-05
10_08_0295 - 16581014-16583071 33 0.18
07_01_0550 - 4099485-4099659,4100295-4100728,4101783-4102187 33 0.18
03_04_0018 - 16484109-16484300,16484575-16484656,16484746-164848... 33 0.18
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 31 1.3
12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912... 30 1.7
06_01_1113 - 9164953-9165044,9166453-9166586,9166624-9166734,916... 30 1.7
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 30 2.3
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 30 2.3
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 30 2.3
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 30 2.3
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 30 2.3
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 30 2.3
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 30 2.3
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 30 2.3
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 30 2.3
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 30 2.3
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 30 2.3
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 30 2.3
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 30 2.3
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 30 2.3
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 30 2.3
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 30 2.3
04_01_0171 - 1927238-1928728,1928819-1929016 30 2.3
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 30 2.3
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 30 2.3
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 30 2.3
01_04_0047 - 15408802-15409068,15409418-15409478,15409516-154096... 30 2.3
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335... 29 4.0
08_02_0194 + 14084828-14085025,14085116-14085788,14085855-140870... 29 4.0
01_01_0052 - 391398-391691,392243-392647 29 4.0
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 29 5.2
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 29 5.2
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 29 5.2
12_02_0679 - 21870084-21870689,21870780-21870977 28 6.9
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 28 6.9
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 28 9.2
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 28 9.2
02_02_0344 + 9182775-9183539,9195912-9196028 28 9.2
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 28 9.2
>10_05_0069 +
8782535-8782920,8783016-8783281,8783588-8783869,
8784559-8784632,8787230-8787461,8788067-8788077
Length = 416
Score = 47.2 bits (107), Expect = 1e-05
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Frame = +3
Query: 213 APGKVILHGEHSVVYGKTAIAVSLGL--RSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 386
APGK+IL GEH+VV+G A+A ++ L R S+ + + E A + L D T
Sbjct: 8 APGKIILAGEHAVVHGSAAVAAAIDLYTRCSLCLMPL-ADDEAAATLELDLKDPGLTFSW 66
Query: 387 EPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 566
P + L L G R P D + R+ E H I L L
Sbjct: 67 -PCGR-LREVLLTDEAAGAREAR-PCSPDRLASIARLLEE-HEIPEAKIWL----SAGLS 118
Query: 567 SFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALI 713
+FL++++ I G P K +++ S+L +G+G GSSA+F V ++G L+
Sbjct: 119 AFLFLYTSILGCR--PGK---VTVSSDLPMGSGLGSSAAFCVSMSGVLL 162
>10_08_0295 - 16581014-16583071
Length = 685
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 248 GRVRKNCDRCQPRPKELHSDKGS--KHSTRTSSPHTFAVRGSTGDHSIGADSQKSV 409
GR R + D CQ R + HS + S S RT SP + RG G G + K V
Sbjct: 350 GRQRAHGDGCQGRSRTRHSSRCSCRCRSRRTRSPSSLTPRGQDGTGDAGGATTKVV 405
>07_01_0550 - 4099485-4099659,4100295-4100728,4101783-4102187
Length = 337
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 642 SELTIGAGTGSSASFAVCLAGALIQLLKLXSLRGI 746
S + +G GTGS+A+FAV GAL+ KL + G+
Sbjct: 66 SGMVLGLGTGSTAAFAVAEIGALLASGKLSGIVGV 100
>03_04_0018 -
16484109-16484300,16484575-16484656,16484746-16484856,
16484937-16485188,16485274-16485677,16486035-16486952,
16486990-16487475,16487566-16487763
Length = 880
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR CL+ + LW ++
Sbjct: 131 PVEPPIVQSKFSNTCGTLVRTHCLINVKLWETV 163
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 361 WIYRRPFHWSRQSKVCSILNWHQG*PANSLGDYPTKSTMTITCEGWR 501
W YR P S K + W QG P L +P T + C WR
Sbjct: 47 WYYRSPHRASSPGKPWPTILWLQGGPEERL-PHPKPPTEHLICVDWR 92
>12_02_0928 +
24488891-24489675,24490369-24490421,24490479-24491229,
24491322-24491533,24491780-24492570,24492686-24492784
Length = 896
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -2
Query: 365 IHARQMY-VDCWFVWSVYF 312
+H RQ+Y + CWF+W YF
Sbjct: 264 VHKRQLYLILCWFLWKGYF 282
>06_01_1113 -
9164953-9165044,9166453-9166586,9166624-9166734,
9166815-9167066,9167152-9168186,9168313-9169187,
9169476-9169673
Length = 898
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 429 LVPV*DGTDF*LSAPMEWSPVDP-----RTANVCGLLVRVECLLPLSLWSSL 289
+VP D D+ + PV+P + +N CG LVR C + + LW ++
Sbjct: 51 VVPRDDDPDYIPMEQADRKPVEPLIVRSKFSNTCGTLVRTRCPINVKLWETV 102
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PVEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PVEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 49 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 81
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PVEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 49 PVEPPIVRSKFSNACGTLVRTRCPINVKLWETV 81
>04_01_0171 - 1927238-1928728,1928819-1929016
Length = 562
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PVEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>01_04_0047 -
15408802-15409068,15409418-15409478,15409516-15409626,
15409707-15409958,15410044-15410270,15410971-15411230,
15411373-15412279,15412370-15412567
Length = 760
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PVEPPIVRSKFSNACGTLVRTRCPINVKLWETV 168
>09_04_0161 -
15232074-15232139,15232299-15232406,15233417-15233506,
15233617-15233733,15234408-15234527,15234930-15236168
Length = 579
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 257 RKNCDRCQPRPKELHS---DKGSKHSTRTSSPHTFAVRGSTGDHSIGADSQKSVPS*TGT 427
R + + C P PK S + S S+R S+P T A R T + + KS T T
Sbjct: 66 RTSANECTPEPKRAQSADRRRPSTPSSRVSTPSTPASRSVTPVRNTVTEGHKSSRRITST 125
Query: 428 RD 433
R+
Sbjct: 126 RN 127
>08_02_0194 +
14084828-14085025,14085116-14085788,14085855-14087082,
14087435-14087686,14087767-14087877,14087967-14088048,
14088323-14088514
Length = 911
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + N CG LVR C + + LW ++
Sbjct: 136 PIEPPIVRSKFINACGTLVRTRCPINVKLWETV 168
>01_01_0052 - 391398-391691,392243-392647
Length = 232
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 429 GITGKFSWRLPHKIDHDYHLRRVEEY 506
G TG + W P I +H R+V+ Y
Sbjct: 79 GFTGTYRWMAPEMIKEKHHTRKVDVY 104
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 49 PVEPPIVRFKFSNACGTLVRTRCPINVKLWETV 81
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LV+ C + + LW ++
Sbjct: 136 PIEPPIVRSKFSNACGTLVKTRCPINVKLWETV 168
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 246 SVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIP--LEPTVKSLFHPK 419
S+ YG+ A+ +SLG+++ + + +V+ A+ + + +L LE K + PK
Sbjct: 268 SMAYGQAAMLLSLGVKAKLYLPKVHKSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPK 327
Query: 420 --LAPGITGKFSWRLPHKIDH 476
LA + G +R ID+
Sbjct: 328 EELAEFLKGPRYFRAQEAIDY 348
>12_02_0679 - 21870084-21870689,21870780-21870977
Length = 267
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + LW ++
Sbjct: 136 PVEPPIVRSKFSNACGTLVRTCCPINVKLWETV 168
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 387 PMEWSPVDPRTANVCGLLVRVECLLPLSLWSSL 289
P+E V + +N CG LVR C + + W ++
Sbjct: 49 PVEPPIVRSKFSNACGTLVRTRCPINVKFWETV 81
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 364 IYRRPFHWSRQSKVCSILNWHQG*PANSLGDYPTKSTMTITCEG 495
I+ P + QSK CS+ WHQ A T +++ C G
Sbjct: 408 IWNGPHKYCDQSK-CSLPLWHQSTSATRTNSAVTPRALSLCCSG 450
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
Frame = +2
Query: 218 GESHLAWRAFGRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFAVRG------STGDH 379
G H A R F +P LHS+ +H S T + G +TG
Sbjct: 489 GNFHHAGREFSSCPCENQLNSEKPM-LHSEINVQHEHAVMSQRTMRLMGKDLTVSTTGGK 547
Query: 380 SIGADSQKSVPS*TGTRDNRQILLEITPQNRP*LSL 487
IG ++ V S I LE+ Q P LSL
Sbjct: 548 CIGETAKVHVNSSVSCHHTTNIFLELPRQGHPFLSL 583
>02_02_0344 + 9182775-9183539,9195912-9196028
Length = 293
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 495 VEEYLHLIKPNFDSLPNNQKNSLRS 569
VEE+ H + P+F P +QK SL+S
Sbjct: 248 VEEHTHPLIPSFPESPFSQKKSLKS 272
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 27.9 bits (59), Expect = 9.2
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Frame = +3
Query: 204 SVSAPGKVILHGEHSVVYGKTAIAVSLG-LRSSIVIKEVNTPHEPAVHIHLPCVDLQETI 380
+V+A K IL ++ ++ G + +A L + +++ + + V I P L+ T+
Sbjct: 302 TVAAKDKSILTKKNPMITGSSLLAARLEKAKDAMMASSTSDVSDTKVVILEPPSFLKRTM 361
Query: 381 P--LEPTVKS--LFHPKLAPG--ITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLP 542
+E +++ F KL TG+F + LP H Y+L+ +EE S P
Sbjct: 362 EKIVEFIIRNGKEFEGKLIEQDRTTGRFPFLLPSNPYHPYYLKLLEETQESKSRGGSSEP 421
Query: 543 NNQKNS 560
++K+S
Sbjct: 422 KDRKSS 427
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,802,747
Number of Sequences: 37544
Number of extensions: 497770
Number of successful extensions: 1398
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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