Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D07
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209722-1|BAD92959.1|  421|Homo sapiens mevalonate kinase varia...    74   5e-13
M88468-1|AAB59362.1|  396|Homo sapiens mevalonate kinase protein.      73   8e-13
BC016140-1|AAH16140.1|  396|Homo sapiens MVK protein protein.          73   8e-13
AF217535-1|AAF82407.1|  396|Homo sapiens mevalonate kinase protein.    73   8e-13
AF217536-1|AAF82406.1|  113|Homo sapiens truncated mevalonate ki...    54   4e-07

>AB209722-1|BAD92959.1|  421|Homo sapiens mevalonate kinase variant
           protein.
          Length = 421

 Score = 74.1 bits (174), Expect = 5e-13
 Identities = 62/171 (36%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPA-VHIHLPCVDLQETIP 383
           VSAPGKVILHGEH+VV+GK A+AVSL LR+ + ++    PH    V ++LP + ++    
Sbjct: 33  VSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQ----PHSNGKVDLNLPNIGIKRAWD 88

Query: 384 LEPTVKSLFHPKLAPG-ITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNS 560
           +   ++SL    L  G +T   S            + +++E   L  P  D     ++ +
Sbjct: 89  V-ARLQSLDTSFLEQGDVTTPTS----------EQVEKLKEVAGL--P--DDCAVTERLA 133

Query: 561 LRSFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALI 713
           + +FLY++  I       + S+DI + SEL  GAG GSSA+++VCLA AL+
Sbjct: 134 VLAFLYLYLSIC-RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALL 183


>M88468-1|AAB59362.1|  396|Homo sapiens mevalonate kinase protein.
          Length = 396

 Score = 73.3 bits (172), Expect = 8e-13
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPA-VHIHLPCVDLQETIP 383
           VSAPGKVILHGEH+VV+GK A+AVSL LR+ + ++    PH    V + LP + ++    
Sbjct: 8   VSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQ----PHSNGKVDLSLPNIGIKRAWD 63

Query: 384 LEPTVKSLFHPKLAPG-ITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNS 560
           +   ++SL    L  G +T   S            + +++E   L  P  D     ++ +
Sbjct: 64  V-ARLQSLDTSFLEQGDVTTPTS----------EQVEKLKEVAGL--P--DDCAVTERLA 108

Query: 561 LRSFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALI 713
           + +FLY++  I       + S+DI + SEL  GAG GSSA+++VCLA AL+
Sbjct: 109 VLAFLYLYLSIC-RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALL 158


>BC016140-1|AAH16140.1|  396|Homo sapiens MVK protein protein.
          Length = 396

 Score = 73.3 bits (172), Expect = 8e-13
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPA-VHIHLPCVDLQETIP 383
           VSAPGKVILHGEH+VV+GK A+AVSL LR+ + ++    PH    V + LP + ++    
Sbjct: 8   VSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQ----PHSNGKVDLSLPNIGIKRAWD 63

Query: 384 LEPTVKSLFHPKLAPG-ITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNS 560
           +   ++SL    L  G +T   S            + +++E   L  P  D     ++ +
Sbjct: 64  V-ARLQSLDTSFLEQGDVTTPTS----------EQVEKLKEVAGL--P--DDCAVTERLA 108

Query: 561 LRSFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALI 713
           + +FLY++  I       + S+DI + SEL  GAG GSSA+++VCLA AL+
Sbjct: 109 VLAFLYLYLSIC-RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALL 158


>AF217535-1|AAF82407.1|  396|Homo sapiens mevalonate kinase protein.
          Length = 396

 Score = 73.3 bits (172), Expect = 8e-13
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPA-VHIHLPCVDLQETIP 383
           VSAPGKVILHGEH+VV+GK A+AVSL LR+ + ++    PH    V + LP + ++    
Sbjct: 8   VSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQ----PHSNGKVDLSLPNIGIKRAWD 63

Query: 384 LEPTVKSLFHPKLAPG-ITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNS 560
           +   ++SL    L  G +T   S            + +++E   L  P  D     ++ +
Sbjct: 64  V-ARLQSLDTSFLEQGDVTTPTS----------EQVEKLKEVAGL--P--DDCAVTERLA 108

Query: 561 LRSFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALI 713
           + +FLY++  I       + S+DI + SEL  GAG GSSA+++VCLA AL+
Sbjct: 109 VLAFLYLYLSIC-RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALL 158


>AF217536-1|AAF82406.1|  113|Homo sapiens truncated mevalonate
           kinase protein.
          Length = 113

 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPA-VHIHLPCVDLQ 371
           VSAPGKVILHGEH+VV+GK A+AVSL LR+ + ++    PH    V + LP + ++
Sbjct: 4   VSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQ----PHSNGKVDLSLPNIGIK 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,914,811
Number of Sequences: 237096
Number of extensions: 2824424
Number of successful extensions: 6327
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6327
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)