Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D07
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical ...    60   2e-09
AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical ...    60   2e-09
AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical ...    60   2e-09
AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical ...    55   6e-08
AC006762-8|AAP31426.1|  295|Caenorhabditis elegans Hypothetical ...    28   6.2  
AC006762-7|AAF60555.1|  375|Caenorhabditis elegans Hypothetical ...    28   6.2  

>AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4c protein.
          Length = 484

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 45/170 (26%), Positives = 86/170 (50%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 386
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 14  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 70

Query: 387 EPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 566
           +  +K+            + +   P + D    L  +      +  + +     Q  ++ 
Sbjct: 71  KDLLKA----------ADRLAAEYPIEEDQPPSLEILVPIARKLSGSCEDQCGVQHLAIL 120

Query: 567 SFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQ 716
           +F Y+  G+       + ++  ++  +L    G GSS ++ VC+A +L+Q
Sbjct: 121 AFWYLLLGV-AHRKRDLLAVKATVRFKLPSCVGLGSSGAYCVCIATSLLQ 169


>AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4b protein.
          Length = 614

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 45/170 (26%), Positives = 86/170 (50%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 386
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 144 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 200

Query: 387 EPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 566
           +  +K+            + +   P + D    L  +      +  + +     Q  ++ 
Sbjct: 201 KDLLKA----------ADRLAAEYPIEEDQPPSLEILVPIARKLSGSCEDQCGVQHLAIL 250

Query: 567 SFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQ 716
           +F Y+  G+       + ++  ++  +L    G GSS ++ VC+A +L+Q
Sbjct: 251 AFWYLLLGV-AHRKRDLLAVKATVRFKLPSCVGLGSSGAYCVCIATSLLQ 299


>AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4d protein.
          Length = 514

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 45/170 (26%), Positives = 86/170 (50%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 386
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 44  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100

Query: 387 EPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 566
           +  +K+            + +   P + D    L  +      +  + +     Q  ++ 
Sbjct: 101 KDLLKA----------ADRLAAEYPIEEDQPPSLEILVPIARKLSGSCEDQCGVQHLAIL 150

Query: 567 SFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQ 716
           +F Y+  G+       + ++  ++  +L    G GSS ++ VC+A +L+Q
Sbjct: 151 AFWYLLLGV-AHRKRDLLAVKATVRFKLPSCVGLGSSGAYCVCIATSLLQ 199


>AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4a protein.
          Length = 607

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +3

Query: 207 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 386
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 44  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100

Query: 387 EPTVKS 404
           +  +K+
Sbjct: 101 KDLLKA 106


>AC006762-8|AAP31426.1|  295|Caenorhabditis elegans Hypothetical
           protein Y42G9A.3b protein.
          Length = 295

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 474 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 647
           HDY L  +    H+ +P  D  P N K  +   +   +  G+  +T+  V  +D+S  S 
Sbjct: 38  HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95

Query: 648 LTIGAGTGSSASFAVCLA 701
             +    G+ +S    +A
Sbjct: 96  SALPEDIGTLSSLTTLIA 113


>AC006762-7|AAF60555.1|  375|Caenorhabditis elegans Hypothetical
           protein Y42G9A.3a protein.
          Length = 375

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 474 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 647
           HDY L  +    H+ +P  D  P N K  +   +   +  G+  +T+  V  +D+S  S 
Sbjct: 38  HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95

Query: 648 LTIGAGTGSSASFAVCLA 701
             +    G+ +S    +A
Sbjct: 96  SALPEDIGTLSSLTTLIA 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,527,162
Number of Sequences: 27780
Number of extensions: 431471
Number of successful extensions: 1314
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)