Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_D02
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.63 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    24   1.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   3.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   3.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 478 LSFIYYCRDMKTYKTNFFCILKFY 407
           L   Y+CR    + T+F+C    Y
Sbjct: 296 LCIYYFCRAFIIFPTHFYCAFSLY 319


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 201 IQNFHPIRNYISCILGR 251
           ++N    RNYI CILG+
Sbjct: 34  LKNDRLTRNYIDCILGK 50


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 201 IQNFHPIRNYISCILGR 251
           ++N    RNY+ C+LG+
Sbjct: 34  LKNDRLTRNYLDCVLGK 50


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 201 IQNFHPIRNYISCILGR 251
           ++N    RNY+ C+LG+
Sbjct: 34  LKNDRLTRNYLDCVLGK 50


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 414 SFIHRMGSMLGHRPY*NFPLC 352
           + I  +G+ L +RP+ +FP C
Sbjct: 682 NLIIHVGTQLIYRPFSHFPRC 702


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 502 GSFNHPSNLSFIYYCRDMKTY 440
           G F+ P N +  Y CR   +Y
Sbjct: 564 GIFSDPKNCAAYYVCRSGLSY 584


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,690
Number of Sequences: 336
Number of extensions: 4737
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)