Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C23
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.8  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
 Frame = +2

Query: 677 PIC--RKNSQT--ELSYNYCVC 730
           P+C  +K  +T   LS NYC+C
Sbjct: 29  PVCSSQKGQKTCLNLSINYCIC 50


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 73  KQCLNYLEIRIINVGSFLNDIDEK 2
           K  LNY+ I +  VGS   D+++K
Sbjct: 364 KFLLNYIFIAVGIVGSACTDVEQK 387


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 632 YTVSVLCYCHL 664
           YT +V+C CH+
Sbjct: 918 YTANVVCICHV 928


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 152 FYVIL*ISLICEFIASFRKNTHNLNCK 72
           +Y  L ISLI   I SF+    +LN K
Sbjct: 180 YYEFLLISLINILIRSFKSRYKDLNQK 206


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 94  IHIT*TVKQCLNYLEIRIINVGSFLN 17
           I +   VKQC +  +I +   G F+N
Sbjct: 108 IEVLHVVKQCYHLQKINVQQSGIFIN 133


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 43  FVFLSNLDIVLQFRLCVF 96
           F F++ L I L F+LC F
Sbjct: 449 FTFITLLTIGLYFQLCEF 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,025
Number of Sequences: 336
Number of extensions: 2687
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)