Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C22
         (827 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058745-1|AAL13974.1|  381|Drosophila melanogaster LP09696p pro...    99   6e-21
AE014297-1417|AAF54727.1|  381|Drosophila melanogaster CG10007-P...    99   6e-21
AY071412-1|AAL49034.1|  419|Drosophila melanogaster RE49527p pro...    29   5.9  
AE014297-4837|AAN14299.1|  492|Drosophila melanogaster CG2003-PB...    29   5.9  
AE014297-4836|AAF57210.1|  492|Drosophila melanogaster CG2003-PA...    29   5.9  

>AY058745-1|AAL13974.1|  381|Drosophila melanogaster LP09696p
           protein.
          Length = 381

 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
 Frame = +3

Query: 417 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 596
           +++ FL+L+ +++G+ N L  KWA+  +  GSDG+   F HP + TL MFLGE LC  VF
Sbjct: 2   DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61

Query: 597 KLVYYKTRNTGGHS-----LTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQM 761
           K++   +   G  S     L+  +  F P+ ++   +LD   + +++ GL LTY +SFQM
Sbjct: 62  KVIRLISNRRGVISDLDSILSQDSSEFRPVSMLLPTLLDAAASILLFTGLYLTYATSFQM 121

Query: 762 FRGSIIVFVAVLSMTF 809
            RG+ ++FV + S  F
Sbjct: 122 IRGAALIFVGIFSTMF 137


>AE014297-1417|AAF54727.1|  381|Drosophila melanogaster CG10007-PA
           protein.
          Length = 381

 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
 Frame = +3

Query: 417 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 596
           +++ FL+L+ +++G+ N L  KWA+  +  GSDG+   F HP + TL MFLGE LC  VF
Sbjct: 2   DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61

Query: 597 KLVYYKTRNTGGHS-----LTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQM 761
           K++   +   G  S     L+  +  F P+ ++   +LD   + +++ GL LTY +SFQM
Sbjct: 62  KVIRLISNRRGVISDLDSILSQDSSEFRPVSMLLPTLLDAAASILLFTGLYLTYATSFQM 121

Query: 762 FRGSIIVFVAVLSMTF 809
            RG+ ++FV + S  F
Sbjct: 122 IRGAALIFVGIFSTMF 137


>AY071412-1|AAL49034.1|  419|Drosophila melanogaster RE49527p
           protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 532 STIHSCRPYLCFWVKCYVYL 591
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AE014297-4837|AAN14299.1|  492|Drosophila melanogaster CG2003-PB,
           isoform B protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 532 STIHSCRPYLCFWVKCYVYL 591
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AE014297-4836|AAF57210.1|  492|Drosophila melanogaster CG2003-PA,
           isoform A protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 532 STIHSCRPYLCFWVKCYVYL 591
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,524,500
Number of Sequences: 53049
Number of extensions: 751731
Number of successful extensions: 1997
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)