Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C19
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    27   0.14 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.97 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   3.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = -3

Query: 301 QFINSASHFINSIYDLIRHTLKFILHVL*K*LYVLCHFLHIFWIAGWC*VFIFCVFNNIV 122
           +F     +FI +IY L   T    LHV     Y+   F HIF+    C  FI  +  NIV
Sbjct: 36  KFCRILKYFIIAIYVLTILTSSVTLHVCFN-SYMYA-FTHIFFFFAICCDFIALIVVNIV 93

Query: 121 RV 116
            V
Sbjct: 94  HV 95



 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 407 VWINNKYK*FCRYLKLF 457
           ++   KY+ FCR LK F
Sbjct: 28  IYHKEKYRKFCRILKYF 44


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 24  TTTTSLFTSI--FRHVRAFTLEYILFSLIWQNRTLTILLKTQKMNTQHQPAI 173
           ++ +SL+T I  +     FT+ YILF+L     T+ +++    ++++ Q  +
Sbjct: 238 SSLSSLYTCIAGYEFNANFTISYILFALFNTFGTILLIMTCSGVHSESQKLV 289


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 795 IYFKYWSLTTLKTRVLC 745
           +YF YWS   L TR++C
Sbjct: 318 LYF-YWSFALLITRIVC 333


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -2

Query: 710 ITVIIKLNLR-LLVEGWKVTRLLKI 639
           +T I+  + R  L+EGWKV ++ +I
Sbjct: 459 LTAIVIFSERPALIEGWKVEKIQEI 483


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 753 VLCKSPY*LYTLQQYYCD-HKTELKVA 676
           VLC SPY ++ L Q Y    KT+  +A
Sbjct: 296 VLCWSPYIVFDLLQVYGHIPKTQTNIA 322


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 657 NFPTFNQQP*VQFYDHSNTVAVYTTSMVIYIKL 755
           N P +++ P   F++ +NT     T  + YI +
Sbjct: 438 NHPVYHKDPHYGFHNVTNTTLQNLTPQLNYISM 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,513
Number of Sequences: 336
Number of extensions: 4498
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)