Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C19
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            28   0.40 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   1.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   2.2  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    25   3.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = +2

Query: 128  IVKNTENEYSTPASDPKNMQEVTQYVQSLLQN-MQDKFQSMSDQIINR--IDEMGSRVDE 298
            IV+N     S+ +   K++ E+ +Y+Q  L+N + D     S  + NR  +D  G  +++
Sbjct: 3216 IVQNFFGWGSSSSRTTKDLPEIRKYLQKRLENGLSDLELLQSQAVANRSDMDWFGCMLED 3275

Query: 299  LEKNITDLM 325
            L +++ + +
Sbjct: 3276 LREDVQEYL 3284


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 342  KMKSRNSFHLSICVRISSQDNLSGST 419
            K +++  FH++ C R +S DNL+  T
Sbjct: 3064 KRQTKTPFHITNCFRTNSADNLNTIT 3089


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 342  KMKSRNSFHLSICVRISSQDNLSGST 419
            K  ++  FH++ C R +S DNL+  T
Sbjct: 3067 KRPTKTPFHIANCFRTNSADNLNTIT 3092


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = -3

Query: 319 ICNILFQFINSASHFINSIYDLI 251
           +C++LF  I+ A +F + ++D++
Sbjct: 74  LCDVLFNVISLAGYFCDVVFDVV 96


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 203 RIVSLPAYFLDRWLVLSIHFLC 138
           R+ S    F DRW+ L I  LC
Sbjct: 3   RLPSFRRSFADRWMTLGIVLLC 24


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 315 QIL*HKLVLKMKSRNSFHLSICVRISSQDNLSGSTININN 434
           QIL HKL L+ + R + HL+      + D + G+ INI N
Sbjct: 393 QIL-HKLGLRERPRLTKHLNNEHVFEAFDRIYGNKINIGN 431


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 315 QIL*HKLVLKMKSRNSFHLSICVRISSQDNLSGSTININN 434
           QIL HKL L+ + R + HL+      + D + G+ INI N
Sbjct: 393 QIL-HKLGLRERPRLTKHLNNEHVFEAFDRIYGNKINIGN 431


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,188
Number of Sequences: 2352
Number of extensions: 17282
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)