Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_C18
(820 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 375 e-104
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 375 e-104
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 375 e-104
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 375 e-104
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 375 e-104
AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p pro... 31 2.5
AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-P... 31 2.5
AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-P... 31 2.5
AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-P... 31 2.5
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 30 4.4
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 30 4.4
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 375 bits (922), Expect = e-104
Identities = 177/213 (83%), Positives = 186/213 (87%)
Frame = +2
Query: 179 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 358
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 359 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 538
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 539 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 718
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP KLL MAG++DCYTS RGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTL 216
Query: 719 GNFXXXXXXXXXXXXXXXXPDLWRDIPLTXSPY 817
GNF PDLW+++PL +PY
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPY 249
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 375 bits (922), Expect = e-104
Identities = 177/213 (83%), Positives = 186/213 (87%)
Frame = +2
Query: 179 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 358
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 359 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 538
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 539 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 718
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP KLL MAG++DCYTS RGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 719 GNFXXXXXXXXXXXXXXXXPDLWRDIPLTXSPY 817
GNF PDLW+++PL +PY
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPY 249
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 375 bits (922), Expect = e-104
Identities = 177/213 (83%), Positives = 186/213 (87%)
Frame = +2
Query: 179 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 358
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 359 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 538
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 539 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 718
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP KLL MAG++DCYTS RGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 719 GNFXXXXXXXXXXXXXXXXPDLWRDIPLTXSPY 817
GNF PDLW+++PL +PY
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPY 249
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 375 bits (922), Expect = e-104
Identities = 177/213 (83%), Positives = 186/213 (87%)
Frame = +2
Query: 179 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 358
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 359 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 538
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 539 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 718
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP KLL MAG++DCYTS RGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 719 GNFXXXXXXXXXXXXXXXXPDLWRDIPLTXSPY 817
GNF PDLW+++PL +PY
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPY 249
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 375 bits (922), Expect = e-104
Identities = 177/213 (83%), Positives = 186/213 (87%)
Frame = +2
Query: 179 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 358
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 359 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 538
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 539 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 718
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP KLL MAG++DCYTS RGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 719 GNFXXXXXXXXXXXXXXXXPDLWRDIPLTXSPY 817
GNF PDLW+++PL +PY
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPY 249
>AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p
protein.
Length = 407
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/112 (21%), Positives = 43/112 (38%)
Frame = +2
Query: 374 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 553
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 554 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGST 709
T+ G + P G G+V + + G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
>AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-PC,
isoform C protein.
Length = 407
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/112 (21%), Positives = 43/112 (38%)
Frame = +2
Query: 374 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 553
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 554 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGST 709
T+ G + P G G+V + + G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
>AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-PA,
isoform A protein.
Length = 407
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/112 (21%), Positives = 43/112 (38%)
Frame = +2
Query: 374 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 553
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 554 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGST 709
T+ G + P G G+V + + G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
>AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-PB,
isoform B protein.
Length = 916
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/112 (21%), Positives = 43/112 (38%)
Frame = +2
Query: 374 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 553
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 554 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGST 709
T+ G + P G G+V + + G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/112 (21%), Positives = 43/112 (38%)
Frame = +2
Query: 374 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 553
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 466 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 518
Query: 554 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGST 709
T+ G + P G G+V + + G++D Y GST
Sbjct: 519 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 570
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/112 (21%), Positives = 43/112 (38%)
Frame = +2
Query: 374 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 553
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 743 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 795
Query: 554 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGST 709
T+ G + P G G+V + + G++D Y GST
Sbjct: 796 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 847
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 185 LPCRAHDHGRDHDRVHEDRRGLXXHRVIRIRREN-RHVHRLEQRPPLLN 42
L C H D R+H ++GL V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 185 LPCRAHDHGRDHDRVHEDRRGLXXHRVIRIRREN-RHVHRLEQRPPLLN 42
L C H D R+H ++GL V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,180,613
Number of Sequences: 53049
Number of extensions: 762587
Number of successful extensions: 3208
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2706
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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