Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_C16
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z82060-10|CAN86903.1| 138|Caenorhabditis elegans Hypothetical p... 61 9e-10
U23412-2|AAN65294.1| 678|Caenorhabditis elegans Glycyl trna syn... 37 0.016
U23412-1|AAK21465.2| 742|Caenorhabditis elegans Glycyl trna syn... 37 0.016
AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical ... 31 0.60
AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical ... 31 0.60
AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain p... 31 0.60
AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain p... 31 0.60
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 1.1
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 31 1.1
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 31 1.1
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 31 1.1
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 31 1.1
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 31 1.1
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 30 1.4
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 30 1.4
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 30 1.8
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.4
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 2.4
U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna syn... 29 2.4
U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna syn... 29 2.4
U64836-8|AAG24063.1| 339|Caenorhabditis elegans Serpentine rece... 29 3.2
U40421-2|AAA81438.1| 453|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 28 7.4
AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical ... 28 7.4
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 9.8
U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and en... 27 9.8
L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical p... 27 9.8
AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type tra... 27 9.8
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 27 9.8
>Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical
protein T27F6.5a protein.
Length = 454
Score = 155 bits (376), Expect = 3e-38
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Frame = +1
Query: 82 LLLXCGLVRPTTSGFFTLLPLARRALDKLENLIKTCIESSGAQRLSLPALTSAGLWAKTG 261
+L+ G + PT GF++LLPL +R +DKL ++ ++SGA ++++P + + LW KTG
Sbjct: 25 MLVENGFILPTAKGFYSLLPLGQRVIDKLCRILDVEFQNSGALKIAMPIVGTQQLWEKTG 84
Query: 262 RXXXXXXXXXXXXDRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQISNKYRDEL 441
R DR L PT EE EL++ L P+ Q P+I+YQI K+RDE+
Sbjct: 85 RWEAMGPEMIRFHDRQQNHMCLQPTAEEMCTELIATLSPLKKSQFPLIVYQIGEKFRDEM 144
Query: 442 RPKHGLLRAREFSMLDAYGAHASSACALQVYGRMATAYEHLF-RALHL--KVHKVEAPSG 612
P+ GL+R R+F M D Y + + Q Y ++ Y+ +F L L V KVEA SG
Sbjct: 145 NPRFGLMRGRQFLMKDMYSFSTDAETSQQTYAQIRQIYDRIFGEILQLDEDVIKVEADSG 204
Query: 613 DMGGSFSHEWQLAATSGEDXIKVCPSCSH 699
GG SHE+ L ++ ED + C +C +
Sbjct: 205 VHGGHISHEYHLKSSLEEDFVNFCENCKN 233
>Z82060-10|CAN86903.1| 138|Caenorhabditis elegans Hypothetical
protein T27F6.5d protein.
Length = 138
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/115 (28%), Positives = 57/115 (49%)
Frame = +1
Query: 82 LLLXCGLVRPTTSGFFTLLPLARRALDKLENLIKTCIESSGAQRLSLPALTSAGLWAKTG 261
+L+ G + PT GF++LLPL +R +DKL ++ ++SGA ++++P + + LW KTG
Sbjct: 25 MLVENGFILPTAKGFYSLLPLGQRVIDKLCRILDVEFQNSGALKIAMPIVGTQQLWEKTG 84
Query: 262 RXXXXXXXXXXXXDRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQISNK 426
R DR L +D I+ +++ I Y +SN+
Sbjct: 85 RWEAMGPEMIRFHDRQQNHMCLQVANRRGNVH-RTDRNTITAQKITISPYCLSNR 138
>U23412-2|AAN65294.1| 678|Caenorhabditis elegans Glycyl trna
synthetase protein1, isoform b protein.
Length = 678
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 316 KYLLAPTYEEAIAELLSDLKPISYKQLPIILYQISNKYRDELRPKHGLLRAREFSMLD 489
K L P + I L + +LP QI +R+E+ P+ GL+R REF+M +
Sbjct: 239 KAFLRPETAQGIFVNFKRLLEFNQGKLPFAAAQIGLGFRNEISPRQGLIRVREFTMCE 296
>U23412-1|AAK21465.2| 742|Caenorhabditis elegans Glycyl trna
synthetase protein1, isoform a protein.
Length = 742
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 316 KYLLAPTYEEAIAELLSDLKPISYKQLPIILYQISNKYRDELRPKHGLLRAREFSMLD 489
K L P + I L + +LP QI +R+E+ P+ GL+R REF+M +
Sbjct: 303 KAFLRPETAQGIFVNFKRLLEFNQGKLPFAAAQIGLGFRNEISPRQGLIRVREFTMCE 360
>AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical
protein Y113G7A.6b protein.
Length = 338
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 425 NTGTNCGRNTGCSGRGSSRCWTRTERTPPQPAPSRS 532
N+G C N G +G GSS T +E P PA + S
Sbjct: 212 NSGVTCSGNNGSTGGGSSNGSTGSEVQPSSPATTDS 247
>AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical
protein Y113G7A.6a protein.
Length = 391
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 425 NTGTNCGRNTGCSGRGSSRCWTRTERTPPQPAPSRS 532
N+G C N G +G GSS T +E P PA + S
Sbjct: 265 NSGVTCSGNNGSTGGGSSNGSTGSEVQPSSPATTDS 300
>AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 372
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 425 NTGTNCGRNTGCSGRGSSRCWTRTERTPPQPAPSRS 532
N+G C N G +G GSS T +E P PA + S
Sbjct: 246 NSGVTCSGNNGSTGGGSSNGSTGSEVQPSSPATTDS 281
>AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 425 NTGTNCGRNTGCSGRGSSRCWTRTERTPPQPAPSRS 532
N+G C N G +G GSS T +E P PA + S
Sbjct: 206 NSGVTCSGNNGSTGGGSSNGSTGSEVQPSSPATTDS 241
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAPYAS 486
+P V SC SC++ P S C + CS A ++ T++ QA + CAP
Sbjct: 32 APRVQPSC-SCQRTTYTQPQQYSCSCQNTAPVQKSCSCAQPVQQQTYQIQASQ-CAPACQ 89
Query: 485 SIENSLALSSP 453
+ S+P
Sbjct: 90 QSCQNQCQSAP 100
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAPYAS 486
+P V SC SC++ P S C + CS A ++ T++ QA + CAP
Sbjct: 32 APRVQPSC-SCQRTTYTQPQQYSCSCQNTAPVQKSCSCAQPVQQQTYQIQASQ-CAPACQ 89
Query: 485 SIENSLALSSP 453
+ S+P
Sbjct: 90 QSCQNQCQSAP 100
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 509 PQPAPSRSTDGWQPPTSIYSAP 574
P+ APS STDGW PT + P
Sbjct: 579 PEVAPSFSTDGWDSPTKSVALP 600
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 509 PQPAPSRSTDGWQPPTSIYSAP 574
P+ APS STDGW PT + P
Sbjct: 620 PEVAPSFSTDGWDSPTKSVALP 641
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAP 495
+P+V SC SC++ P S C + CS A ++ T++ QA + CAP
Sbjct: 32 APKVQPSC-SCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQ-CAP 86
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAP 495
+P+V SC SC++ P S C + CS A ++ T++ QA + CAP
Sbjct: 32 APKVQPSC-SCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQ-CAP 86
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 509 PQPAPSRSTDGWQPPTSIYSAP 574
P+ APS STDGW PT + P
Sbjct: 579 PEVAPSFSTDGWDSPTKSVALP 600
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAP 495
+P++ SC SC++ P S C + CS A ++ T++ QA + CAP
Sbjct: 32 APKIQPSC-SCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQ-CAP 86
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAP 495
+P++ SC SC++ P S C + CS A ++ T++ QA + CAP
Sbjct: 32 APKIQPSC-SCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQ-CAP 86
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAP 495
+P V SC SC++ P S C + CS A ++ T++ QA + CAP
Sbjct: 34 APRVQPSC-SCQQTTYAQPPQYSCSCQNTAPVQTSCSCAQPVQQQTYQVQASQ-CAP 88
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 58 EITCKSQKLLLXCGLVRPTTSGFFT-LLPLARRALDKLENLIKTCIE 195
EITC S K+LL + P GF + L L RR + +++T +E
Sbjct: 1552 EITCVSLKMLLEMFMSLPLHDGFTSDLNELQRRQRQHCDGIVQTVVE 1598
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 58 EITCKSQKLLLXCGLVRPTTSGFFT-LLPLARRALDKLENLIKTCIE 195
EITC S K+LL + P GF + L L RR + +++T +E
Sbjct: 1549 EITCVSLKMLLEMFMSLPLHDGFTSDLNELQRRQRQHCDGIVQTVVE 1595
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 58 EITCKSQKLLLXCGLVRPTTSGFFT-LLPLARRALDKLENLIKTCIE 195
EITC S K+LL + P GF + L L RR + +++T +E
Sbjct: 1552 EITCVSLKMLLEMFMSLPLHDGFTSDLNELQRRQRQHCDGIVQTVVE 1598
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 58 EITCKSQKLLLXCGLVRPTTSGFFT-LLPLARRALDKLENLIKTCIE 195
EITC S K+LL + P GF + L L RR + +++T +E
Sbjct: 1549 EITCVSLKMLLEMFMSLPLHDGFTSDLNELQRRQRQHCDGIVQTVVE 1595
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -3
Query: 665 SPEVAASCHSCEKLPPISPDGASTLCTFKCRARNRCS*AVAIRP*TWRAQAEEACAP 495
+P+V SC SC++ P P S C + CS A ++ T+ + CAP
Sbjct: 32 APKVQPSC-SCQQTPYTQPQETSCSCQNTAPVQTSCSCAQPVQQQTYLVPTSQ-CAP 86
>U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform b protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 382 SYKQLPIILYQISNKYRDELRPKHGLLRAREFSMLDAYGAHASSACA----LQVYGRMAT 549
S++ LPI L Q N R E + LR REF + + A A+ A A Q+ A
Sbjct: 211 SHRDLPIKLNQWCNVVRWEFKHPTPFLRTREFLWQEGHTAFANPADAEKEVFQILDLYAG 270
Query: 550 AYEHLFRALHLKVHKVEAPSGDMGGSFS 633
Y L +K K E GG F+
Sbjct: 271 VYTDLLAIPVVKGRKSEKEK-FAGGDFT 297
>U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform a protein.
Length = 581
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 382 SYKQLPIILYQISNKYRDELRPKHGLLRAREFSMLDAYGAHASSACA----LQVYGRMAT 549
S++ LPI L Q N R E + LR REF + + A A+ A A Q+ A
Sbjct: 211 SHRDLPIKLNQWCNVVRWEFKHPTPFLRTREFLWQEGHTAFANPADAEKEVFQILDLYAG 270
Query: 550 AYEHLFRALHLKVHKVEAPSGDMGGSFS 633
Y L +K K E GG F+
Sbjct: 271 VYTDLLAIPVVKGRKSEKEK-FAGGDFT 297
>U64836-8|AAG24063.1| 339|Caenorhabditis elegans Serpentine
receptor, class h protein187 protein.
Length = 339
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 685 DTLLXGLRQRSPRAATRVRSFLPYRPTELRLCAL 584
DTLL +++RS R+ + V++ + TE+++C L
Sbjct: 306 DTLLGLMKRRSSRSQSTVQNIFSMKVTEMKVCYL 339
>U40421-2|AAA81438.1| 453|Caenorhabditis elegans Hypothetical
protein C02B8.5 protein.
Length = 453
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 323 CWLRHTKRQSRSYCQTSSRSHTSNYRLYYI 412
CW S+ C T+ RS+ R+YY+
Sbjct: 75 CWSTMYNTASKDVCPTALRSNVDYVRIYYV 104
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 470 GSSRCWTRTE--RTPPQPAPSRSTDGWQPPTSIYSAPYT 580
G +C R + + P PAP+ D +QP T Y P T
Sbjct: 278 GQCKCPERRQPPKKPYPPAPTMPPDAYQPTTEAYYYPPT 316
>AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical
protein K02D7.2 protein.
Length = 193
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 574 LHLKVHKVEAPSGDMGGSFSHEWQL 648
+HLK H + D G SFS W L
Sbjct: 87 MHLKTHSLPCVCNDCGKSFSRPWLL 111
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 332 RHTKRQSRSYCQTSSRSHTSNYR 400
RH+KR+SRS ++SS S T Y+
Sbjct: 182 RHSKRRSRSRSRSSSGSRTPPYK 204
>U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and
endoderm determinationprotein 2 protein.
Length = 174
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 383 HTSNYRLYYIRLAINTGTNCGRNTGCSGRGSSRCWTRTERTPPQPAPSRSTDGWQPPTS 559
+ + Y YY ++ N TG SS T T + P +PS ST PP++
Sbjct: 49 YVNTYASYYPTAMDSSSLNISPTTGSPN--SSHFTTFTHFSTPSTSPSTSTQSSTPPSN 105
>L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical
protein C06E1.11 protein.
Length = 371
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 698 CEQDGHTFXWSSPEVAASCHSCEKLPPISPDGASTLC 588
C++ G + W E A SC+ +S D A+ LC
Sbjct: 158 CKECGKDYDWKKYEEAQGVCSCQLQIVLSNDAATKLC 194
>AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 383 HTSNYRLYYIRLAINTGTNCGRNTGCSGRGSSRCWTRTERTPPQPAPSRSTDGWQPPTS 559
+ + Y YY ++ N TG SS T T + P +PS ST PP++
Sbjct: 49 YVNTYASYYPTAMDSSSLNISPTTGSPN--SSHFTTFTHFSTPSTSPSTSTQSSTPPSN 105
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 349 IAELLSDLKPISYKQLPIILYQISNKYRDELRPKHGLLRAR 471
+ LLS + + K+ ++LY+I KY D LRP L+ +
Sbjct: 151 VVNLLSCSRNYTRKRAVLLLYKIFLKYPDALRPTFPRLKEK 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,760,423
Number of Sequences: 27780
Number of extensions: 328612
Number of successful extensions: 1187
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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