Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C15
         (375 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4JBZ3 Cluster: Conserved Archaeal protein; n=1; Sulfol...    32   3.9  
UniRef50_Q4XTX4 Cluster: Putative uncharacterized protein; n=4; ...    31   6.9  
UniRef50_Q8I2P4 Cluster: Putative uncharacterized protein PFI130...    31   9.1  

>UniRef50_Q4JBZ3 Cluster: Conserved Archaeal protein; n=1;
           Sulfolobus acidocaldarius|Rep: Conserved Archaeal
           protein - Sulfolobus acidocaldarius
          Length = 237

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = +1

Query: 100 YLFIKYVY-----NDKNTKKHY*YFIINCSKFILVLSSILFGML*NYISLYSNYFYNK 258
           YLF++ +      N+ + K+ Y   II  S+F + L+SIL  +    +SL   ++YNK
Sbjct: 137 YLFLQEIIKNIDRNNLDVKRAYEETIIKLSEFSVTLNSILLSLSNEDVSLLVGHYYNK 194


>UniRef50_Q4XTX4 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1031

 Score = 31.1 bits (67), Expect = 6.9
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +1

Query: 85  F*IIIYLFIKYVYNDKNTKKHY*YFIINCSKFILVLSSILFGML*NYISLYSN 243
           F I+  LF+KY + +KN K  +  F  N    +L+ S+I   +L N  S++ N
Sbjct: 209 FEILKKLFLKYEFFEKNKKNDF-QFFENILTSLLLKSNIFINVLNNLYSIFFN 260


>UniRef50_Q8I2P4 Cluster: Putative uncharacterized protein PFI1300c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI1300c - Plasmodium falciparum
           (isolate 3D7)
          Length = 1922

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 91  IIIYLFIKYVYNDKNTKKHY*YFIINCSKFILVLSSILFG-ML*NYISLYSNYFY 252
           +I+Y+ I +  N +NT   + Y  IN  K+I     I F  +L + I L   YFY
Sbjct: 654 MIVYIIINHYENKRNTIGFFFYGNINIRKYIYKNEQIYFSFVLIHDILLSCKYFY 708


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,952,012
Number of Sequences: 1657284
Number of extensions: 3078256
Number of successful extensions: 6622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6620
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)