Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C15
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.5  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +3

Query: 54  NILVKHTLCVFLNYYLFIY*VRL**QKYKKALLIFYNKLFKVHPGVIINFIRNALEL 224
           + L +HT+  F NY  F Y + L        +L+ Y +L +V   ++ N  RN L L
Sbjct: 145 DFLCRHTVEYFQNYIHFFYQLLL--YLITDMILMRYKELNRV---ILDNMSRNHLFL 196


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 141 KALLIFYNKLFKVHPGVIINFIR 209
           K ++ FY K  K   G  I FIR
Sbjct: 128 KPIIAFYYKPIKTLNGHEIKFIR 150


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 75  LCVFLNYYLFI 107
           LCV+  YY FI
Sbjct: 111 LCVYYFYYAFI 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,973
Number of Sequences: 336
Number of extensions: 1013
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)