Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_C14
(722 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 1.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 2.5
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 23 2.5
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 23 3.3
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 4.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.4
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 560 SWMQQGAGMYIPIFM*QDMLRLGHQVTGVSVRN 462
+W +QG G Y+P + D+ H V G +V N
Sbjct: 1833 AWYRQGVGKYLPSDIDPDLCT--HIVYGFAVLN 1863
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/12 (75%), Positives = 11/12 (91%), Gaps = 1/12 (8%)
Frame = -1
Query: 242 TTPIVPHF-YSH 210
+TPIVPHF Y+H
Sbjct: 92 STPIVPHFAYNH 103
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 23.0 bits (47), Expect = 2.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 462 IADGNTCYLVTEPKHILLHKDGNIHPSTLLHPGD 563
+A G T L P H+L+ D + + L PGD
Sbjct: 170 LASGRT--LTVTPSHLLVLDDRTMKYAQKLQPGD 201
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 538 GCIFPSLCSKICLGSVTK*QVF 473
G + S+C C G +TK +F
Sbjct: 519 GKVETSICKNFCFGFITKQLIF 540
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 148 SVSTSPPGKPATSTTSQNLSSPASSTSSTSST 179
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 104 SVSTSPPGKPATSTASQNLSSPASSTSSTSST 135
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 SVNSVPPVAPAIPLRIIALSRPASDHPSLHTT 251
SV++ PP PA LS PAS S +T
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,720
Number of Sequences: 336
Number of extensions: 4045
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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