BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_C14
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB032961-1|BAA86449.2| 789|Homo sapiens KIAA1135 protein protein. 68 4e-11
BC111030-1|AAI11031.1| 666|Homo sapiens SPIRE2 protein protein. 60 6e-09
AJ422077-1|CAD19439.1| 728|Homo sapiens Spir-2 protein protein. 55 2e-07
AJ277587-1|CAB96370.1| 620|Homo sapiens Spir-1 protein protein. 40 0.012
AB058735-1|BAB47461.1| 694|Homo sapiens KIAA1832 protein protein. 36 0.11
AL445199-4|CAM24665.1| 1749|Homo sapiens kinase non-catalytic C-... 36 0.15
AB051555-1|BAB21859.1| 1207|Homo sapiens KIAA1768 protein protein. 36 0.15
>AB032961-1|BAA86449.2| 789|Homo sapiens KIAA1135 protein protein.
Length = 789
Score = 67.7 bits (158), Expect = 4e-11
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Frame = +3
Query: 318 GATGGTEFTLNSSNCISLQQILEAFNSSISEEHAWALCYQSARCFQRCIADGNTCYLVTE 497
GA GG S + +SL++IL +N I+EE AWA+CYQ + + V
Sbjct: 60 GAAGGAAG--GSRDALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRS 117
Query: 498 PKHILLHKDGNIHPSTLLHPGDDSSRVEVTS---------EQTLVVNLALVIYHALDYTH 650
I + +DG + TL DD+ + E ++ +L ++IY ALDY
Sbjct: 118 AAQIRVWRDGAV---TLAPAADDAGEPPPVAGKLGYSQCMETEVIESLGIIIYKALDYGL 174
Query: 651 AEDEERLISPDLEGLITXMTS 713
E+EER +SP LE LI M +
Sbjct: 175 KENEERELSPPLEQLIDHMAN 195
>BC111030-1|AAI11031.1| 666|Homo sapiens SPIRE2 protein protein.
Length = 666
Score = 60.5 bits (140), Expect = 6e-09
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +3
Query: 363 ISLQQILEAFNSSISEEHAWALCYQSARCFQRCIADGNTCYLVTEPKHILLHKDGNIHPS 542
+SL+++L+A+ ++EE AWA+C+Q R + G+ + + +LL DG++
Sbjct: 22 LSLEEVLKAYEQPLNEEQAWAVCFQGCRGLR-----GSPGRRLRDTGDLLLRGDGSVGAR 76
Query: 543 TLLHPGDDSSRVEV-TSEQTLVVNLALVIYHALDYTHAEDEERLISPDLEGLITXMTSCD 719
+ V + +SE V +L IY ALD+ E EER +SP LE LI M + D
Sbjct: 77 EPEAAEPATMVVPLASSEAQTVQSLGFAIYRALDWGLDESEERELSPQLERLIDLMANND 136
>AJ422077-1|CAD19439.1| 728|Homo sapiens Spir-2 protein protein.
Length = 728
Score = 55.2 bits (127), Expect = 2e-07
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +3
Query: 363 ISLQQILEAFNSSISEEHAWALCYQSARCFQRCIADGNTCYLVTEPKHILLHKDGNIHPS 542
+SL+++L+A+ ++EE A A+C+Q R + G+ + + +LL DG++
Sbjct: 36 LSLEEVLKAYEQPLNEEQALAVCFQGCRGLR-----GSPGRRLRDTGDLLLRGDGSVGAR 90
Query: 543 TLLHPGDDSSRVEV-TSEQTLVVNLALVIYHALDYTHAEDEERLISPDLEGLITXMTSCD 719
+ V + +SE V +L IY ALD+ E EER +SP LE LI M + D
Sbjct: 91 EPEAAEPATMVVPLASSEAQTVQSLGFAIYRALDWGLDESEERELSPQLERLIDLMANND 150
>AJ277587-1|CAB96370.1| 620|Homo sapiens Spir-1 protein protein.
Length = 620
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 600 LVVNLALVIYHALDYTHAEDEERLISPDLEGLITXMTS 713
++ +L ++IY ALDY E+EER +SP LE LI M +
Sbjct: 3 VIXSLXIIIYKALDYGLKENEERELSPPLEQLIXHMAN 40
>AB058735-1|BAB47461.1| 694|Homo sapiens KIAA1832 protein protein.
Length = 694
Score = 36.3 bits (80), Expect = 0.11
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 525 GNIHPSTLL---HPGDDSSRVEVTSEQTLVVNLALVIYHALDYTHAEDEERLISPDLEGL 695
G +HP HP QT V +L IY ALD+ E EER +SP LE L
Sbjct: 50 GPLHPPAAFSPPHPPAVPPSDRAPVPQT-VQSLGFAIYRALDWGLDESEERELSPQLERL 108
Query: 696 ITXMTSCD 719
I M + D
Sbjct: 109 IDLMANND 116
>AL445199-4|CAM24665.1| 1749|Homo sapiens kinase non-catalytic
C-lobe domain (KIND) containing 1 protein.
Length = 1749
Score = 35.9 bits (79), Expect = 0.15
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +3
Query: 363 ISLQQILEAFNSSISEEHAWALCYQSARCFQRCIADGNTCYLVTEPKHILLHKDGNIHPS 542
+SL IL + +SE+ AWA+C + + + L P + + GN+
Sbjct: 37 VSLADILSLRDRGLSEQEAWAVCLECSLSMRSVAHAAIFQSLCITPDTLAFNTSGNVCFM 96
Query: 543 TLLHPGDDSSRV----EVTSE--QTLVVNLALVIYHALDYTHAEDEERLISPDLEGLITX 704
L + + V +VT + + +L + AL+Y E +S DLE L++
Sbjct: 97 EQLSDDPEGAFVPPEFDVTGNTFEAHIYSLGATLKAALEYVAEPTLEPRLSQDLEALLSR 156
Query: 705 MTSCD 719
M + D
Sbjct: 157 MQAED 161
>AB051555-1|BAB21859.1| 1207|Homo sapiens KIAA1768 protein protein.
Length = 1207
Score = 35.9 bits (79), Expect = 0.15
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +3
Query: 363 ISLQQILEAFNSSISEEHAWALCYQSARCFQRCIADGNTCYLVTEPKHILLHKDGNIHPS 542
+SL IL + +SE+ AWA+C + + + L P + + GN+
Sbjct: 38 VSLADILSLRDRGLSEQEAWAVCLECSLSMRSVAHAAIFQSLCITPDTLAFNTSGNVCFM 97
Query: 543 TLLHPGDDSSRV----EVTSE--QTLVVNLALVIYHALDYTHAEDEERLISPDLEGLITX 704
L + + V +VT + + +L + AL+Y E +S DLE L++
Sbjct: 98 EQLSDDPEGAFVPPEFDVTGNTFEAHIYSLGATLKAALEYVAEPTLEPRLSQDLEALLSR 157
Query: 705 MTSCD 719
M + D
Sbjct: 158 MQAED 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,759,219
Number of Sequences: 237096
Number of extensions: 2685288
Number of successful extensions: 11441
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11431
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -