Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C13
         (539 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NCR8 Cluster: ENSANGP00000030379; n=2; Culicidae|Rep:...   138   6e-32
UniRef50_A6NNL5 Cluster: Uncharacterized protein ENSP00000342254...   132   7e-30
UniRef50_Q0VG49 Cluster: RIKEN cDNA 2300009A05 gene; n=3; Theria...    87   2e-16
UniRef50_Q0KI32 Cluster: CG34148-PA; n=1; Drosophila melanogaste...    77   3e-13
UniRef50_A2EU36 Cluster: Putative uncharacterized protein; n=1; ...    38   0.20 
UniRef50_A7BJ65 Cluster: BmRelish1; n=2; Bombyx mori|Rep: BmReli...    34   1.8  
UniRef50_Q22BW9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_Q11UX4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_Q5GAS1 Cluster: Znf; n=11; Poaceae|Rep: Znf - Zea mays ...    33   5.6  

>UniRef50_A0NCR8 Cluster: ENSANGP00000030379; n=2; Culicidae|Rep:
           ENSANGP00000030379 - Anopheles gambiae str. PEST
          Length = 152

 Score =  138 bits (335), Expect = 6e-32
 Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
 Frame = +3

Query: 42  YSYVKDDQFGMSNFNWKVGN-SNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIKVA 218
           +S V++DQFG S+FNW +   +NY ILRTGC+PY+KYHC+R+  +DL + D+F R IKVA
Sbjct: 47  HSDVRNDQFGRSHFNWTLDTGANYHILRTGCYPYMKYHCTRRPWQDLTLDDRFFRCIKVA 106

Query: 219 NLGIPCLLYGLAATQLIRHEELVHTSKG--PVPIYFLLPEDKGSLH 350
           NLG+P L YGLAA  LIRH ELV    G  PVPIYFL  EDKGSL+
Sbjct: 107 NLGLPQLFYGLAAVFLIRHVELVQLGDGRPPVPIYFLYAEDKGSLY 152


>UniRef50_A6NNL5 Cluster: Uncharacterized protein ENSP00000342254;
           n=17; Eumetazoa|Rep: Uncharacterized protein
           ENSP00000342254 - Homo sapiens (Human)
          Length = 160

 Score =  132 bits (318), Expect = 7e-30
 Identities = 56/103 (54%), Positives = 75/103 (72%)
 Frame = +3

Query: 42  YSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIKVAN 221
           YS V++DQFG+S+FNW V  +NY +LRTGCFP+IKYHCS+   +DL   ++F   +KV N
Sbjct: 58  YSAVRNDQFGLSHFNWPVQGANYHVLRTGCFPFIKYHCSKAPWQDLARQNRFFTALKVVN 117

Query: 222 LGIPCLLYGLAATQLIRHEELVHTSKGPVPIYFLLPEDKGSLH 350
           LGIP LLYGL +    R  E VHTS GP+ +YFL  ED+G+++
Sbjct: 118 LGIPTLLYGLGSWLFARVTETVHTSYGPITVYFLNKEDEGAMY 160


>UniRef50_Q0VG49 Cluster: RIKEN cDNA 2300009A05 gene; n=3;
           Theria|Rep: RIKEN cDNA 2300009A05 gene - Mus musculus
           (Mouse)
          Length = 208

 Score = 87.4 bits (207), Expect = 2e-16
 Identities = 36/62 (58%), Positives = 46/62 (74%)
 Frame = +3

Query: 42  YSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIKVAN 221
           YS V +DQFG+S+FNW V  +NY +LRTGCFP+IKYHCS+   +DL   D+F   +KV N
Sbjct: 55  YSAVHNDQFGLSHFNWPVLGANYHVLRTGCFPFIKYHCSKAPWQDLAPQDRFFTALKVIN 114

Query: 222 LG 227
           LG
Sbjct: 115 LG 116


>UniRef50_Q0KI32 Cluster: CG34148-PA; n=1; Drosophila
           melanogaster|Rep: CG34148-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 105

 Score = 76.6 bits (180), Expect = 3e-13
 Identities = 31/55 (56%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 51  VKDDQFGMSNFNWKVGN-SNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIK 212
           V +DQ GMS+FNW + N +NY ILRT C+PY+KYHCS+++ +DL + DKF R +K
Sbjct: 38  VANDQRGMSHFNWTLENGTNYHILRTACYPYMKYHCSKREVQDLWLEDKFFRFLK 92


>UniRef50_A2EU36 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1082

 Score = 37.5 bits (83), Expect = 0.20
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 54  KDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIKVANLGIP 233
           KD++  +S  N +  N   ++     F  + YHC     E  N+SD+ +RII + N  I 
Sbjct: 209 KDEKLAISKSNSEKINEFNKLTALNGFGAMNYHCRITFIEKENVSDQVLRIISITNQSIA 268

Query: 234 C 236
           C
Sbjct: 269 C 269


>UniRef50_A7BJ65 Cluster: BmRelish1; n=2; Bombyx mori|Rep: BmRelish1
           - Bombyx mori (Silk moth)
          Length = 937

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +1

Query: 214 LQI*VYLVYCMALQQPSL 267
           L + VYLVYCMALQQPSL
Sbjct: 920 LHLKVYLVYCMALQQPSL 937


>UniRef50_Q22BW9 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1161

 Score = 33.9 bits (74), Expect = 2.4
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -1

Query: 407  LYHTLVFLINK*CLQYGVLMQRSFIFWKQKVYWYWPFACVNKFFMPYKLGCC 252
            +Y  L F  NK CLQ G  + +S  F +  + +  P+ C N+    Y+LG C
Sbjct: 1037 MYQDLDFDSNKVCLQIGDKLLQSTNFQENSLQYCIPYYCQNQERKYYQLGIC 1088


>UniRef50_Q11UX4 Cluster: Putative uncharacterized protein; n=1;
            Cytophaga hutchinsonii ATCC 33406|Rep: Putative
            uncharacterized protein - Cytophaga hutchinsonii (strain
            ATCC 33406 / NCIMB 9469)
          Length = 1807

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +3

Query: 36   PTYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIIKV 215
            P+YS++  D++G   FN   GNS  + L  G FPY       K A D N +   +  I++
Sbjct: 869  PSYSHLNYDRWGTYKFNNLPGNSENK-LPNGVFPYTDQ--QNKSAVDNNAAVYALSTIQM 925

Query: 216  ANLGIPCLLY 245
               G   ++Y
Sbjct: 926  PTAGTMHVVY 935


>UniRef50_Q5GAS1 Cluster: Znf; n=11; Poaceae|Rep: Znf - Zea mays
           (Maize)
          Length = 337

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 325 SKKYIGTGPLLV*TSSSCLISWVAARPYSKQGIP 224
           +K+Y+G  PLL  +S S    +VAA P  ++G+P
Sbjct: 74  AKRYLGANPLLAPSSPSSRFLFVAASPLPQRGLP 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,912,852
Number of Sequences: 1657284
Number of extensions: 8441789
Number of successful extensions: 15515
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15510
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)