Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C07
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043698-5|AAL65782.1|  104|Caenorhabditis elegans Saposin-like ...    36   0.030
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    31   0.64 
AC084158-18|AAK68583.1|  300|Caenorhabditis elegans Hypothetical...    30   2.0  
AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine re...    29   4.5  
Z82051-4|CAB04818.2|  339|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>AF043698-5|AAL65782.1|  104|Caenorhabditis elegans Saposin-like
           protein family protein17 protein.
          Length = 104

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 19/83 (22%), Positives = 36/83 (43%)
 Frame = -2

Query: 731 PPADSSICVLTCLARSMGRTSRSLT*ASILNTANSSASCIHEVFSNSVRHCVRRYARSPS 552
           PP+ +++  +TC+A   G  ++ L     +   +  A C+ EV ++S  H    Y     
Sbjct: 22  PPSQATLACITCVATVKGVEAKMLHEGGNVAKHDVDAICLKEVPTHSAEHLCEEYGEHEV 81

Query: 551 KLMQALNA**IGNRMVCTRPNSC 483
            +M  L    +  +M+C     C
Sbjct: 82  DVMVTLIKQDVPPKMICQELQKC 104


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +3

Query: 429  SDMDDACVRYRPILLPSETRVRPRADHPVPYLLRVQRLHELAGTPGVP 572
            ++MDDA +   P  + +E R R RA H  P +LR  RL    G  G P
Sbjct: 3113 AEMDDAELAGLPADMQNEAR-RARAQHVEPNMLRYHRLLFRGGVGGAP 3159


>AC084158-18|AAK68583.1|  300|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.9 protein.
          Length = 300

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 63  RDVTLEAPTPPKVSRT 110
           +DVT EAPTPPK ++T
Sbjct: 155 KDVTAEAPTPPKTTKT 170


>AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 68 protein.
          Length = 284

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 406 AVATHLGAQIWMTLVSGIVLYFSLPRHEFGRVQTILFPIYYAFN 537
           AV   +   +W+T++ GI+    L      RV ++ FP +Y  N
Sbjct: 76  AVKNFIFITLWLTIIFGIIRTSLLFLTTLDRVISLFFPFFYCAN 119


>Z82051-4|CAB04818.2|  339|Caenorhabditis elegans Hypothetical
           protein T23D5.7 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/64 (23%), Positives = 33/64 (51%)
 Frame = +1

Query: 457 IVLYFSLPRHEFGRVQTILFPIYYAFNACMSLLGLLAYLRTQCLTEFENTSWIQLALLLA 636
           +++ F+     F  ++ +++P+ ++FNA     G + Y   + L     T  + LA+  A
Sbjct: 44  LIVLFAAMGIAFASIEFVMYPVLHSFNA-----GYVFYTTNRPLNVSNETLTVLLAVYTA 98

Query: 637 VFSI 648
           ++SI
Sbjct: 99  LYSI 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,462,874
Number of Sequences: 27780
Number of extensions: 301073
Number of successful extensions: 900
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)